RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CT47A1Q5JQC4 288 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 C1orf220Q5T0J3 134 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 STXBP5Q5T5C0 1151 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 SDHAF4Q5VUM1 108 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TXNDC8Q6A555 127 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 SPOPLQ6IQ16 392 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 PHLDB3Q6NSJ2 640 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TTI2Q6NXR4 508 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 VITQ6UXI7 678 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TPRG1Q6ZUI0 275 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ACOT1Q86TX2 421 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FAM35AQ86V20 835 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MON1AQ86VX9 555 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FAM114A1Q8IWE2 563 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ZC3H3Q8IXZ2 948 aaKnown RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 NUP93Q8N1F7 819 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CRYBG2Q8N1P7 616 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MAB21L3Q8N8X9 362 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TTC16Q8NEE8 873 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 SLC2A14Q8TDB8 520 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 OVCA2Q8WZ82 227 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FBXO32Q969P5 355 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 SLC35C1Q96A29 364 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FAM122AQ96E09 287 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CYFIP2Q96F07 1278 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MSANTD3Q96H12 275 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TMEM176AQ96HP8 235 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FAM81BQ96LP2 452 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 HEXIM2Q96MH2 286 aaKnown RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 SRRTQ9BXP5 876 aaKnown RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 SLC46A2Q9BY10 475 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MFRPQ9BY79 579 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 BCO2Q9BYV7 579 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ZNF518BQ9C0D4 1074 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 NACA2Q9H009 215 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 DPEP3Q9H4B8 488 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CLSTN2Q9H4D0 955 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TBC1D17Q9HA65 648 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 KIF9Q9HAQ2 790 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TRPC7Q9HCX4 862 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ZNF334Q9HCZ1 680 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 TRPV5Q9NQA5 729 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.64□□□□□ -1.67
SNX1-205ENST00000559339 HEBP1Q9NRV9 189 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 KRT82Q9NSB4 513 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CISHQ9NSE2 258 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FAM49BQ9NUQ9 324 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 COMMD8Q9NX08 183 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TRPM5Q9NZQ8 1165 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ZDBF2Q9HCK1 2354 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TRIOO75962 3097 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TECTAO75443 2155 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PLXNA3P51805 1871 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 KRBA1A5PL33 1030 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ZNF840PA6NDX5 716 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 FAM170BA6NMN3 283 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 CLDN5O00501 218 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 MOSPD3O75425 235 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 MBD3O95983 291 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PDGFBP01127 241 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 AFPP02771 609 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 TPM2P07951 284 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 CCDC130P13994 396 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 NPR3P17342 541 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 BMP6P22004 513 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 FCARP24071 287 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ERCC5P28715 1186 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 ADORA2BP29275 332 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 MAGEA9P43362 315 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 TUBP50607 506 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 SLC5A3P53794 718 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 MARSP56192 900 aaKnown RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 STX17P56962 302 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 MAP3K7CLP57077 242 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 GOLGA8FQ08AF8 430 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 GOLGA8DPQ0D2H9 430 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 KCNH2Q12809 1159 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 IFRD2Q12894 506 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 TAF10Q12962 218 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 NR1H3Q13133 447 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 CUL2Q13617 745 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ZNF268Q14587 947 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 CBWD6Q4V339 395 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ZNF394Q53GI3 561 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 CBWD3Q5JTY5 395 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 CBWD5Q5RIA9 395 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 SASS6Q6UVJ0 657 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 TMEM150AQ86TG1 271 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 TADA2BQ86TJ2 420 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 RALGPS2Q86X27 583 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 DDX42Q86XP3 938 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNX1-205ENST00000559339 FUKQ8N0W3 1084 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PPM1KQ8N3J5 372 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 KIAA1958Q8N8K9 716 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ARL14EPQ8N8R7 260 aaPredicted RBP4.63□□□□□ -1.67
SNX1-205ENST00000559339 C12orf29Q8N999 325 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 PJA1Q8NG27 643 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 FAM3CQ92520 227 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 ELMO3Q96BJ8 720 aa4.63□□□□□ -1.67
SNX1-205ENST00000559339 NT5C1BQ96P26 610 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms