RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ODF2LQ9ULJ1 636 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 MRPS17Q9Y2R5 130 aaKnown RBP6.28□□□□□ -1.4
USP3-212ENST00000559276 STYXL1Q9Y6J8 313 aa6.28□□□□□ -1.4
USP3-212ENST00000559276 DCDC2BA2VCK2 349 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CHURC1-FNTBB4DL54 471 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 H3BQF6 201 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 K7ENM7 598 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 ZNF263O14978 683 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 HNRNPDLO14979 420 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 POLR2DO15514 142 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 PPP1R37O75864 691 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 HMGA1P17096 107 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 PLCG1P19174 1290 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 GABRR2P28476 465 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 WEE1P30291 646 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 USP8P40818 1118 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CXCL12P48061 93 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 FNTBP49356 437 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 ACOT2P49753 483 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 LIG4P49917 911 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CCR3P51677 355 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CORO7P57737 925 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 KRT83P78385 493 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CYP4F8P98187 520 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 KCNA1Q09470 495 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 SPEM2Q0P670 501 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 KARSQ15046 597 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 LPAL2Q16609 132 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CCDC142Q17RM4 750 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 SLC39A12Q504Y0 691 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 DSTYKQ6XUX3 929 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 GPBP1Q86WP2 473 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 ELMOD1Q8N336 334 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 SPEM1Q8N4L4 309 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 MYCT1Q8N699 235 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CELF5Q8N6W0 485 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 STKLD1Q8NE28 680 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 TTC8Q8TAM2 541 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 NOC3LQ8WTT2 800 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 RAD54LQ92698 747 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CNTNAP3BQ96NU0 1288 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 FAM83CQ9BQN1 747 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 IER2Q9BTL4 223 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 MSTO1Q9BUK6 570 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 SLC46A2Q9BY10 475 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 FGFBP2Q9BYJ0 223 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CNTNAP3Q9BZ76 1288 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 GPR88Q9GZN0 384 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 SMG9Q9H0W8 520 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 ST6GALNAC4Q9H4F1 302 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 MRPL44Q9H9J2 332 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 RPF1Q9H9Y2 349 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 HPS4Q9NQG7 708 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 POLR3BQ9NW08 1133 aaPredicted RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 WDR70Q9NW82 654 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 VPS18Q9P253 973 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 HSFX1Q9UBD0 423 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 KCNG1Q9UIX4 513 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 RWDD2AQ9UIY3 292 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 CCL26Q9Y258 94 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.27□□□□□ -1.41
USP3-212ENST00000559276 GREB1Q4ZG55 1949 aa6.27□□□□□ -1.41
USP3-212ENST00000559276 H0YCG3 227 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 SLC26A4O43511 780 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 EXTL3O43909 919 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 GDF9O60383 454 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 SHOX2O60902 331 aaPredicted RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 IPO7O95373 1038 aaKnown RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 F11P03951 625 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 HAPLN1P10915 354 aaPredicted RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 ODC1P11926 461 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 EEF1GP26641 437 aaKnown RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 HOXA6P31267 233 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 MATR3P43243 847 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP3-212ENST00000559276 ALDH1A3P47895 512 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 GPR15P49685 360 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 CASP5P51878 434 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 EPHB3P54753 998 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 NRLP54845 237 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 ADKP55263 362 aaKnown RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 CDK17Q00537 523 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 AMPD2Q01433 879 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 APBA1Q02410 837 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 LMNB2Q03252 620 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 PLD1Q13393 1074 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 TMEM132DQ14C87 1099 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 PON2Q15165 354 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 TSR1Q2NL82 804 aaKnown RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 TTC31Q49AM3 519 aaPredicted RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 DNAJC21Q5F1R6 531 aaKnown RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 ZNF569Q5MCW4 686 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 GPR158Q5T848 1215 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 TMCO4Q5TGY1 634 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 PAPD7Q5XG87 772 aaKnown RBP6.26□□□□□ -1.41
USP3-212ENST00000559276 WSCD1Q658N2 575 aa6.26□□□□□ -1.41
USP3-212ENST00000559276 ICE2Q659A1 982 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms