RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 USP33Q8TEY7 942 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 EZH1Q92800 747 aaPredicted RBP13.19□□□□□ -0.3
TRPM1-210ENST00000559179 MYLPFQ96A32 169 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 CBWD1Q9BRT8 395 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 NUSAP1Q9BXS6 441 aaKnown RBP13.19□□□□□ -0.3
TRPM1-210ENST00000559179 SMPD4Q9NXE4 827 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 CLIC4Q9Y696 253 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 THADAQ6YHU6 1953 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 EPG5Q9HCE0 2579 aa13.19□□□□□ -0.3
TRPM1-210ENST00000559179 LNP1A1A4G5 178 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 PATE3B3GLJ2 98 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 TRIM66O15016 1216 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 KLF8O95600 359 aaPredicted RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 C1QTNF9P0C862 333 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 SPINK2P20155 84 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 BCKDHBP21953 392 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 LMO2P25791 158 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 MAGEA11P43364 429 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 MAPK8P45983 427 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 ATXN3P54252 364 aaPredicted RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 MRPS21P82921 87 aaKnown RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 DUOXA2Q1HG44 320 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 TDRD10Q5VZ19 366 aaKnown RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 CCDC73Q6ZRK6 1079 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 TXNDC5Q8NBS9 432 aaKnown RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 OR6B3Q8NGW1 331 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 RLN3Q8WXF3 142 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
TRPM1-210ENST00000559179 PNKPQ96T60 521 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 SLC32A1Q9H598 525 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 GCNT4Q9P109 453 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 MMP17Q9ULZ9 603 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 CPQQ9Y646 472 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 ACACBO00763 2458 aa13.18□□□□□ -0.3
TRPM1-210ENST00000559179 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 K7EQS6 105 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 GABRDO14764 452 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 ZBTB24O43167 697 aaPredicted RBP13.17□□□□□ -0.3
TRPM1-210ENST00000559179 PPP1R37O75864 691 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 GNL1P36915 607 aaPredicted RBP13.17□□□□□ -0.3
TRPM1-210ENST00000559179 OPRD1P41143 372 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 SLC6A11P48066 632 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 PPP3CCP48454 512 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 CASP5P51878 434 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 IRX4P78413 519 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 KDSRQ06136 332 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 LMAN2Q12907 356 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 RESTQ13127 1097 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 BYSLQ13895 437 aaKnown RBP13.17□□□□□ -0.3
TRPM1-210ENST00000559179 CRY1Q16526 586 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 BTBD8Q5XKL5 378 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 SCARA3Q6AZY7 606 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 FAM171BQ6P995 826 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 TMEFF1Q8IYR6 380 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 RDH13Q8NBN7 331 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 DEFB124Q8NES8 71 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 WHAMMQ8TF30 809 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 SPATA17Q96L03 361 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 SLITRK1Q96PX8 696 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 PKMYT1Q99640 499 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 NACA2Q9H009 215 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 ARHGEF4Q9NR80 690 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 CFAP97Q9P2B7 532 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 ZMIZ1Q9ULJ6 1067 aa13.17□□□□□ -0.3
TRPM1-210ENST00000559179 KMT2BQ9UMN6 2715 aaPredicted RBP13.16□□□□□ -0.3
TRPM1-210ENST00000559179 F8VP50 259 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 KIAA0391O15091 583 aaKnown RBP13.16□□□□□ -0.3
TRPM1-210ENST00000559179 KAT7O95251 611 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 ADH1CP00326 375 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 CFIP05156 583 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 CEACAM1P13688 526 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 PFKLP17858 780 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 TNNI1P19237 187 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
TRPM1-210ENST00000559179 USP46P62068 366 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 TNNC1P63316 161 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 DHCR24Q15392 516 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 KIAA1211LQ6NV74 962 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 NUDT18Q6ZVK8 323 aa13.16□□□□□ -0.3
TRPM1-210ENST00000559179 DDX42Q86XP3 938 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRPM1-210ENST00000559179 OR5B17Q8NGF7 314 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms