RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZFYVE19Q96K21 471 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 ZNF518BQ9C0D4 1074 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 SDCBP2Q9H190 292 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 LMAN1LQ9HAT1 526 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 CYP3A43Q9HB55 503 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 GTSE1Q9NYZ3 720 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 GCNT4Q9P109 453 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 NDRG2Q9UN36 371 aaKnown RBP18.72■□□□□ 0.59
SMAD3-210ENST00000559092 TCHHQ07283 1943 aa18.72■□□□□ 0.59
SMAD3-210ENST00000559092 SPECC1L-ADORA2AF8WAN1 911 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 KINO60870 393 aaKnown RBP18.71■□□□□ 0.59
SMAD3-210ENST00000559092 EPB41P11171 864 aaKnown RBP18.71■□□□□ 0.59
SMAD3-210ENST00000559092 TCF3P15923 654 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 HDCP19113 662 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 CTHP32929 405 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 ASPAP45381 313 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 RAP1GAPP47736 663 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 LRRC63Q05C16 580 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 PDGFRLQ15198 375 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 KRT39Q6A163 491 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 SCARA5Q6ZMJ2 495 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 ZC3H3Q8IXZ2 948 aaKnown RBP18.71■□□□□ 0.59
SMAD3-210ENST00000559092 ADSSL1Q8N142 457 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 NUP93Q8N1F7 819 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 KIAA1958Q8N8K9 716 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 TAS1R2Q8TE23 839 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 CYP2S1Q96SQ9 504 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 DNAI2Q9GZS0 605 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 CHRDQ9H2X0 955 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 TRPC7Q9HCX4 862 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 F5P12259 2224 aa18.71■□□□□ 0.59
SMAD3-210ENST00000559092 ZNF840PA6NDX5 716 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 CLDN5O00501 218 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 SLC16A3O15427 465 aaKnown RBP18.7■□□□□ 0.58
SMAD3-210ENST00000559092 RTN3O95197 1032 aaPredicted RBP18.7■□□□□ 0.58
SMAD3-210ENST00000559092 CKMP06732 381 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 CHRNB1P11230 501 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 PPP1R2P41236 205 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 USP46P62068 366 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 AMPD2Q01433 879 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 TNK2Q07912 1038 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 INCA1Q0VD86 236 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 STIM1Q13586 685 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 LRRC32Q14392 662 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 DGKKQ5KSL6 1271 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 PAQR9Q6ZVX9 377 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 ACOT1Q86TX2 421 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 OVCA2Q8WZ82 227 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 SMARCD1Q96GM5 515 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 SLITRK1Q96PX8 696 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 SLC22A12Q96S37 553 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 NIF3L1Q9GZT8 377 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 TMEM30AQ9NV96 361 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 COMMD8Q9NX08 183 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 ARHGAP26Q9UNA1 814 aa18.7■□□□□ 0.58
SMAD3-210ENST00000559092 YWHAQP27348 245 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 NDST1P52848 882 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 CACNA2D1P54289 1103 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 MTAPQ13126 283 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 RUNX3Q13761 415 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 ANKRD40Q6AI12 368 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 SPOPLQ6IQ16 392 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 FAM35AQ86V20 835 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 FUKQ8N0W3 1084 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 SYNPOQ8N3V7 929 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 TTC39CQ8N584 583 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-210ENST00000559092 ELMO3Q96BJ8 720 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 DHTKD1Q96HY7 919 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-210ENST00000559092 MED10Q9BTT4 135 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 FAM126AQ9BYI3 521 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-210ENST00000559092 FAM124BQ9H5Z6 455 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-210ENST00000559092 DMAP1Q9NPF5 467 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-210ENST00000559092 IL37Q9NZH6 218 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 VPS13AQ96RL7 3174 aa18.69■□□□□ 0.58
SMAD3-210ENST00000559092 C2orf78A6NCI8 922 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 PRR23AA6NEV1 266 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 PSMA7O14818 248 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 SOX9P48436 509 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 TAF10Q12962 218 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 PPP2R5DQ14738 602 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 MTF1Q14872 753 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 ZNF77Q15935 545 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 ASCL5Q7RTU5 278 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 FBXL13Q8NEE6 735 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 PDZD8Q8NEN9 1154 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 OSCP1Q8WVF1 389 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 EEF2KMTQ96G04 330 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 KCNK16Q96T55 309 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 NT5C1AQ9BXI3 368 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 APOBEC3GQ9HC16 384 aaKnown RBP18.68■□□□□ 0.58
SMAD3-210ENST00000559092 CSNK1G1Q9HCP0 422 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 HPS4Q9NQG7 708 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 PRMT8Q9NR22 394 aaPredicted RBP18.68■□□□□ 0.58
SMAD3-210ENST00000559092 RAB20Q9NX57 234 aa18.68■□□□□ 0.58
SMAD3-210ENST00000559092 TNFRSF10BO14763 440 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 AP1G2O75843 785 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 MXI1P50539 228 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 SLC7A9P82251 487 aa18.67■□□□□ 0.58
SMAD3-210ENST00000559092 CSTF1Q05048 431 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms