RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 CUEDC2Q9H467 287 aa11.43□□□□□ -0.58
AP3S2-206ENST00000558806 ZSCAN16Q9H4T2 348 aaPredicted RBP11.43□□□□□ -0.58
AP3S2-206ENST00000558806 CRTAC1Q9NQ79 661 aa11.43□□□□□ -0.58
AP3S2-206ENST00000558806 ZFHX4Q86UP3 3567 aa11.43□□□□□ -0.58
AP3S2-206ENST00000558806 SPTBN2O15020 2390 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 BCLAF3A2AJT9 711 aaKnown RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 SLC9A3R1O14745 358 aaPredicted RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 DCLK1O15075 740 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 TACC1O75410 805 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 CAVIN2O95810 425 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 FAM163BP0C2L3 166 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 TNNI1P19237 187 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 PMLP29590 882 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 GBP1P32455 592 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 GNL1P36915 607 aaPredicted RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 OPRD1P41143 372 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 NASPP49321 788 aaPredicted RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 USP46P62068 366 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 TNNC1P63316 161 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 SLC7A9P82251 487 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 AMPD3Q01432 767 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 CREB5Q02930 508 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 SNRNP35Q16560 246 aaKnown RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 USP39Q53GS9 565 aaKnown RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 N4BP2L1Q5TBK1 243 aaPredicted RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 TRAPPC11Q7Z392 1133 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 USP33Q8TEY7 942 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 INTS4Q96HW7 963 aaKnown RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 C8orf48Q96LL4 319 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 FNBP1Q96RU3 617 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 LSM14BQ9BX40 385 aaKnown RBP11.42□□□□□ -0.58
AP3S2-206ENST00000558806 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 SNX25Q9H3E2 840 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 SMOC1Q9H4F8 434 aa11.42□□□□□ -0.58
AP3S2-206ENST00000558806 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ACACBO00763 2458 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ZNF840PA6NDX5 716 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 F8VP50 259 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 K7EQS6 105 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 KCNK5O95279 499 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 OLFM2O95897 454 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 CYP17A1P05093 508 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 DLATP10515 647 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 EIF2DP41214 584 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 SEC13P55735 322 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 SNRPFP62306 86 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 MRPS21P82921 87 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 SHC2P98077 582 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ZXDBP98169 803 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 STK38Q15208 465 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 C2orf27AQ580R0 203 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 MDH1BQ5I0G3 518 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 TDRD10Q5VZ19 366 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 PMS2CLQ68D20 193 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 HS2ST1Q7LGA3 356 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 FILIP1Q7Z7B0 1213 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 DDX42Q86XP3 938 aaKnown RBP eCLIP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ADGRG2Q8IZP9 1017 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 GLIS3Q8NEA6 775 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 OR6B3Q8NGW1 331 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ZNF507Q8TCN5 953 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 HPS3Q969F9 1004 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 SLITRK1Q96PX8 696 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 EDEM2Q9BV94 578 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ELOVL4Q9GZR5 314 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 AGPAT3Q9NRZ7 376 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 KBTBD4Q9NVX7 518 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 MMP17Q9ULZ9 603 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 MTMR6Q9Y217 621 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 CPQQ9Y646 472 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 SPAG17Q6Q759 2223 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 KIAA1549LQ6ZVL6 1849 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 KMT2BQ9UMN6 2715 aaPredicted RBP11.41□□□□□ -0.58
AP3S2-206ENST00000558806 ANAPC1Q9H1A4 1944 aa11.41□□□□□ -0.58
AP3S2-206ENST00000558806 EPG5Q9HCE0 2579 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 UBE4BO95155 1302 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 CACNA1BQ00975 2339 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 STX6O43752 255 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 PPP6R2O75170 966 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 ALDH1A2O94788 518 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 STAU1O95793 577 aaKnown RBP11.4□□□□□ -0.58
AP3S2-206ENST00000558806 ABL1P00519 1130 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 OAS1P00973 400 aaKnown RBP11.4□□□□□ -0.58
AP3S2-206ENST00000558806 CST3P01034 146 aaPredicted RBP11.4□□□□□ -0.58
AP3S2-206ENST00000558806 PTPN1P18031 435 aaKnown RBP11.4□□□□□ -0.58
AP3S2-206ENST00000558806 HOXD13P35453 343 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 ASIC1P78348 528 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 CYP24A1Q07973 514 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 TAF10Q12962 218 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 PSMD6Q15008 389 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 DHCR24Q15392 516 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 E2F4Q16254 413 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 CRY1Q16526 586 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 GAB4Q2WGN9 574 aa11.4□□□□□ -0.58
AP3S2-206ENST00000558806 WDR72Q3MJ13 1102 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms