RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	TYMP	P19971	482 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	PDC	P20941	246 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	ALDH1A3	P47895	512 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	CASP5	P51878	434 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	EPHB3	P54753	998 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	EPHA5	P54756	1037 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	CSTF1	Q05048	431 aa	Known RBP	7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	SLC39A12	Q504Y0	691 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	WSCD1	Q658N2	575 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	ARMCX5	Q6P1M9	558 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	SV2B	Q7L1I2	683 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	LRRTM3	Q86VH5	581 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	TMC8	Q8IU68	726 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	DCLK2	Q8N568	766 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	PDILT	Q8N807	584 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	STKLD1	Q8NE28	680 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	GLIS3	Q8NEA6	775 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	GIPC2	Q8TF65	315 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	NOC3L	Q8WTT2	800 aa	Known RBP	7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	POMGNT1	Q8WZA1	660 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	SMARCD2	Q92925	531 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	KCNN1	Q92952	543 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	HPS3	Q969F9	1004 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	DNAJC19	Q96DA6	116 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	LRRC3B	Q96PB8	259 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	USP28	Q96RU2	1077 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	LPIN3	Q9BQK8	851 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	PYM1	Q9BRP8	204 aa	Known RBP	7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	FAM213A	Q9BRX8	229 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	STRA6	Q9BX79	667 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	BCO2	Q9BYV7	579 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	PCIF1	Q9H4Z3	704 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	MRPL44	Q9H9J2	332 aa	Known RBP	7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	DPP3	Q9NY33	737 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	STYXL1	Q9Y6J8	313 aa		7.55	□□□□□ -1.2
MARK3-215	ENST00000558787	CEP250	Q9BV73	2442 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	LAMTOR5	O43504	91 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	LILRB5	O75023	590 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	MICAL2	O94851	1124 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	PRPF6	O94906	941 aa	Known RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	GCNT3	O95395	438 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	LMNA	P02545	664 aa	Known RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ODC1	P11926	461 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	PSMC3	P17980	439 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	GABRR2	P28476	465 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	HOXC13	P31276	330 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	STAT6	P42226	847 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	SOX9	P48436	509 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	CYP4F8	P98187	520 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	TFAM	Q00059	246 aa	Known RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	MTAP	Q13126	283 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	MYBPC2	Q14324	1141 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	SLC39A14	Q15043	492 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	CCDC142	Q17RM4	750 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	SLFN12L	Q6IEE8	588 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ZNF852	Q6ZMS4	543 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	C8orf86	Q6ZUL3	223 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	GAREM2	Q75VX8	874 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	CD302	Q8IX05	232 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	FAM200A	Q8TCP9	573 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	CLDN23	Q96B33	292 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	BORCS6	Q96GS4	357 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ZFYVE19	Q96K21	471 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	CALR3	Q96L12	384 aa	Known RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ACCS	Q96QU6	501 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	SEPT5	Q99719	369 aa	Predicted RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	MKNK1	Q9BUB5	465 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ZCWPW1	Q9H0M4	648 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	SMG9	Q9H0W8	520 aa	Known RBP	7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ATXN3L	Q9H3M9	355 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ST6GALNAC4	Q9H4F1	302 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ASB7	Q9H672	318 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	TMLHE	Q9NVH6	421 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	CCDC39	Q9UFE4	941 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	MAFF	Q9ULX9	164 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	AGAP1	Q9UPQ3	857 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	DERA	Q9Y315	318 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	SCN1A	P35498	2009 aa		7.54	□□□□□ -1.2
MARK3-215	ENST00000558787	ANK1	P16157	1881 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	DMXL1	Q9Y485	3027 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	SLC38A8	A6NNN8	435 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	KPNA7	A9QM74	516 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	ZNF263	O14978	683 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	HCRT	O43612	131 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	PRAMEF12	O95522	483 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	ITGB3	P05106	788 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	CYP11A1	P05108	521 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	GAP43	P17677	238 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	ATF6	P18850	670 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	SCP2	P22307	547 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	ACAT1	P24752	427 aa	Known RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	CCNE1	P24864	410 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	POLR2B	P30876	1174 aa	Known RBP	7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	GPR15	P49685	360 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	TAF6	P49848	677 aa		7.53	□□□□□ -1.2
MARK3-215	ENST00000558787	PLD1	Q13393	1074 aa		7.53	□□□□□ -1.2

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