RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 DUPD1Q68J44 220 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 SND1Q7KZF4 910 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 JAMLQ86YT9 394 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 TSEN2Q8NCE0 465 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 OR6B3Q8NGW1 331 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 CCDC26Q8TAB7 109 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 RSAD1Q9HA92 442 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 RANBP2P49792 3224 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 A8MXQ7 604 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 RALAP11233 206 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 WARSP23381 471 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 IL1R2P27930 398 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 RPL34P49207 117 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 ADCY2Q08462 1091 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 CUL1Q13616 776 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 FAM183BPQ6ZVS7 135 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 TOP6BLQ8N6T0 577 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 IFT81Q8WYA0 676 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 KLHL11Q9NVR0 708 aa13.63□□□□□ -0.23
SMAD3-207ENST00000558763 R3HDM2Q9Y2K5 976 aaKnown RBP13.63□□□□□ -0.23
SMAD3-207ENST00000558763 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 CEP290O15078 2479 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 AGPSO00116 658 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 GABRDO14764 452 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 DAPK3O43293 454 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 SETSIPP0DME0 302 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 CCDC130P13994 396 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 COILP38432 576 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 TNNT3P45378 269 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 FNTAP49354 379 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 AARSP49588 968 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 SCNN1GP51170 649 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PDE4CQ08493 712 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PPIGQ13427 754 aaKnown RBP eCLIP13.62□□□□□ -0.232e-8■□□□□ 9.8
SMAD3-207ENST00000558763 CCDC137Q6PK04 289 aaKnown RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 OLFML1Q6UWY5 402 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 C16orf59Q7L2K0 433 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 TMEM110Q86TL2 294 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 MREGQ8N565 214 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 APPL2Q8NEU8 664 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 SLCO2A1Q92959 643 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 MAGOHBQ96A72 148 aaKnown RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PAAF1Q9BRP4 392 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PLVAPQ9BX97 442 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 CHST7Q9NS84 486 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 C3orf70A6NLC5 250 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 C2CD4BA6NLJ0 364 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PIK3R2O00459 728 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 UPP2O95045 317 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 EOMESO95936 686 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 POMCP01189 267 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 THP07101 528 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PDGFRBP09619 1106 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PSMA2P25787 234 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PTPN7P35236 360 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 GJC1P36383 396 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 FLT3P36888 993 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 GNL1P36915 607 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 RGS7P49802 495 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 FAM189BP81408 668 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 FAM102AQ5T9C2 384 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 KIAA0319Q5VV43 1072 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 MFSD7Q6UXD7 560 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 CYP4V2Q6ZWL3 525 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 POLNQ7Z5Q5 900 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 STK32AQ8WU08 396 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 ATG4AQ8WYN0 398 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 RAPGEF5Q92565 580 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-207ENST00000558763 ERP44Q9BS26 406 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 OSBPL8Q9BZF1 889 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 SYNCQ9H7C4 482 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 ZDHHC18Q9NUE0 388 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 SLC38A7Q9NVC3 462 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 PCDHB7Q9Y5E2 793 aa13.62□□□□□ -0.23
SMAD3-207ENST00000558763 ABHD14A-ACY1A0A1B0GW23 586 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 ZBBXA8MT70 800 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
SMAD3-207ENST00000558763 KCNJ1P48048 391 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 GATMP50440 423 aa13.61□□□□□ -0.23
SMAD3-207ENST00000558763 CLCNKBP51801 687 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms