RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SFXN1Q9H9B4 322 aa6.77□□□□□ -1.33
ZEB1-211ENST00000558440 PARD6AQ9NPB6 346 aa6.77□□□□□ -1.33
ZEB1-211ENST00000558440 RIC8AQ9NPQ8 531 aa6.77□□□□□ -1.33
ZEB1-211ENST00000558440 DACT1Q9NYF0 836 aa6.77□□□□□ -1.33
ZEB1-211ENST00000558440 DUSP12Q9UNI6 340 aa6.77□□□□□ -1.33
ZEB1-211ENST00000558440 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 GPR179Q6PRD1 2367 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 PATJQ8NI35 1801 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 A0A0U1RQF3 1178 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 IPO5O00410 1097 aaKnown RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 TRIM13O60858 407 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 IGHDP01880 384 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 DBHP09172 617 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 CTSAP10619 480 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 CHMLP26374 656 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SREBF1P36956 1147 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 LIFRP42702 1097 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 NASPP49321 788 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SETQ01105 290 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SLC7A5Q01650 507 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 RNASELQ05823 741 aaKnown RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 NONOQ15233 471 aaKnown RBP eCLIP6.76□□□□□ -1.333e-6■■■■□ 21.8
ZEB1-211ENST00000558440 HEATR6Q6AI08 1181 aaKnown RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 EFCAB12Q6NXP0 572 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 ZC3H14Q6PJT7 736 aaKnown RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 PAQR3Q6TCH7 311 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SYNE3Q6ZMZ3 975 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 GPR149Q86SP6 731 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 DDX53Q86TM3 631 aaKnown RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 MICU3Q86XE3 530 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SMAP1Q8IYB5 467 aaPredicted RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 KIAA2013Q8IYS2 634 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 LRRC71Q8N4P6 559 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 FANCBQ8NB91 859 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 ADCY4Q8NFM4 1077 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SLC22A17Q8WUG5 538 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 RSPH1Q8WYR4 309 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 RMDN1Q96DB5 314 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 SHDQ96IW2 340 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 ZNF577Q9BSK1 485 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 ZCCHC4Q9H5U6 513 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 TBC1D22BQ9NU19 505 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 IGSF9Q9P2J2 1179 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 GABBR1Q9UBS5 961 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 STK39Q9UEW8 545 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 PCDHB10Q9UN67 800 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 PCDHA10Q9Y5I2 948 aa6.76□□□□□ -1.33
ZEB1-211ENST00000558440 RBM8AQ9Y5S9 174 aaKnown RBP6.76□□□□□ -1.33
ZEB1-211ENST00000558440 CNOT1A5YKK6 2376 aaKnown RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 MED19A0JLT2 244 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 SMCO2A6NFE2 343 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 FAM86B1E9PN63 330 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 hCG_1984214I3L0E3 225 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 AURKAO14965 403 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 SGSM2O43147 1006 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 CYBBP04839 570 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 EPHX1P07099 455 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 FAM86B2P0C5J1 330 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 DARSP14868 501 aaKnown RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 GSPT1P15170 499 aaKnown RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 FGFR4P22455 802 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 KLRC2P26717 231 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 GPC3P51654 580 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 PUM1Q14671 1186 aaKnown RBP eCLIP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 PTPN14Q15678 1187 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 LETM2Q2VYF4 491 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 EEF1DP3Q658K8 133 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 TWF2Q6IBS0 349 aaKnown RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 GLB1LQ6UWU2 654 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 C15orf39Q6ZRI6 1047 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 TMEM173Q86WV6 379 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 HOMEZQ8IX15 550 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 ZNF713Q8N859 430 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 STAMQ92783 540 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 MAP4K1Q92918 833 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 IGSF21Q96ID5 467 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 ZNF668Q96K58 619 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 C20orf173Q96LM9 149 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 MCMBPQ9BTE3 642 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 LRRC2Q9BYS8 371 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 CHST12Q9NRB3 414 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 NRBP2Q9NSY0 501 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 RBM28Q9NW13 759 aaKnown RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 KIAA1522Q9P206 1035 aaPredicted RBP6.75□□□□□ -1.33
ZEB1-211ENST00000558440 WNT16Q9UBV4 365 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 INPP5FQ9Y2H2 1132 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 R4GN57 208 aa6.75□□□□□ -1.33
ZEB1-211ENST00000558440 ARID2Q68CP9 1835 aa6.74□□□□□ -1.33
ZEB1-211ENST00000558440 USP24Q9UPU5 2620 aa6.74□□□□□ -1.33
ZEB1-211ENST00000558440 IGLV3-22A0A075B6J6 115 aa6.74□□□□□ -1.33
ZEB1-211ENST00000558440 NARSO43776 548 aaKnown RBP6.74□□□□□ -1.33
ZEB1-211ENST00000558440 BUB1BO60566 1050 aaPredicted RBP6.74□□□□□ -1.33
ZEB1-211ENST00000558440 PPM1BO75688 479 aa6.74□□□□□ -1.33
ZEB1-211ENST00000558440 SSBP05455 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
ZEB1-211ENST00000558440 GALTP07902 379 aa6.74□□□□□ -1.33
ZEB1-211ENST00000558440 CYP3A4P08684 503 aa6.74□□□□□ -1.33
ZEB1-211ENST00000558440 SFPQP23246 707 aaKnown RBP eCLIP6.74□□□□□ -1.335e-7■■■□□ 16.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms