RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 SYNCQ9H7C4 482 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TBC1D22BQ9NU19 505 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TMEM74BQ9NUR3 256 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 BCCIPQ9P287 314 aaKnown RBP eCLIP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 CORO2BQ9UQ03 480 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 DERAQ9Y315 318 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 AFG3L2Q9Y4W6 797 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 PCDHGB6Q9Y5F9 930 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZNF335Q9H4Z2 1342 aaPredicted RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 COL27A1Q8IZC6 1860 aaPredicted RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 CCDC78A2IDD5 438 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 CXorf49A8MYA2 514 aaPredicted RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZBED4O75132 1171 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ATF2P15336 505 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TSHRP16473 764 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 PAX3P23760 479 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ADD2P35612 726 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 BMPR1AP36894 532 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 AVPR1BP47901 424 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 AFF3P51826 1226 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 BCAT1P54687 386 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ANTXR2P58335 489 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 RNASE9P60153 205 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 FPGSQ05932 587 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TBL3Q12788 808 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 NFIXQ14938 502 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 SEPT2Q15019 361 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 BAK1Q16611 211 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZNF529Q6P280 563 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 BBS12Q6ZW61 710 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 GSTA5Q7RTV2 222 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZNF804AQ7Z570 1209 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 RBM12BQ8IXT5 1001 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 SLC15A3Q8IY34 581 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZDHHC14Q8IZN3 488 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 MPP5Q8N3R9 675 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 D2HGDHQ8N465 521 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TMEM57Q8N5G2 664 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TTC9BQ8N6N2 239 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 PDILTQ8N807 584 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 VPS37AQ8NEZ2 397 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ZMIZ2Q8NF64 920 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 NUDT10Q8NFP7 164 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TBC1D15Q8TC07 691 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 HTRA1Q92743 480 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 RSPRY1Q96DX4 576 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 NUDT11Q96G61 164 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 C5orf34Q96MH7 638 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 PWWP2AQ96N64 755 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TRAPPC9Q96Q05 1148 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 PIGSQ96S52 555 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 VRK1Q99986 396 aaPredicted RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 DDX23Q9BUQ8 820 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 INO80BQ9C086 356 aaPredicted RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 ARMT1Q9H993 441 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 GALNT9Q9HCQ5 603 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 UBN1Q9NPG3 1134 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 TFCP2L1Q9NZI6 479 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 SRP68Q9UHB9 627 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 KCNE5Q9UJ90 142 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 DTNAQ9Y4J8 743 aa1.53□□□□□ -2.16
CTDSPL2-202ENST00000558373 A0A1W2PS29 197 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 NT5C1B-RDH14C9J2C7 533 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 POLRMTO00411 1230 aaKnown RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SLC3A2P08195 630 aaKnown RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 IRF1P10914 325 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 ALOX12P18054 663 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 CR2P20023 1033 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 MATN1P21941 496 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 ARL3P36405 182 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 ADCY8P40145 1251 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 STAT1P42224 750 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 TPTEP56180 551 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 AIMP2Q13155 320 aaKnown RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 PRAMEF14Q5SWL7 426 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 ANO7Q6IWH7 933 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SARM1Q6SZW1 724 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 GLB1LQ6UWU2 654 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SESTD1Q86VW0 696 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SLC44A2Q8IWA5 706 aaPredicted RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 KBTBD2Q8IY47 623 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 TMEFF1Q8IYR6 380 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 PCYOX1LQ8NBM8 494 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SLC17A8Q8NDX2 589 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 MDGA1Q8NFP4 955 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 OTUD7AQ8TE49 926 aaPredicted RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 FDXACB1Q9BRP7 624 aaPredicted RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 CCDC68Q9H2F9 335 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SMURF2Q9HAU4 748 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 DIAPH3Q9NSV4 1193 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SMC4Q9NTJ3 1288 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 LIN7CQ9NUP9 197 aaKnown RBP1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 HCN3Q9P1Z3 774 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 DNAJB11Q9UBS4 358 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 DKK4Q9UBT3 224 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 MAN2B2Q9Y2E5 1009 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 SPATA31A1Q5TZJ5 1347 aa1.52□□□□□ -2.17
CTDSPL2-202ENST00000558373 LOC100509620A0A075B734 347 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms