RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 KIAA1586Q9HCI6 787 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 PDE11AQ9HCR9 933 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 AVENQ9NQS1 362 aaPredicted RBP10.97□□□□□ -0.65
TPM1-212ENST00000558347 ST7Q9NRC1 585 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 CALCOCO1Q9P1Z2 691 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 WNT16Q9UBV4 365 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 MAFFQ9ULX9 164 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 L1RE1Q9UN81 338 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 YIPF1Q9Y548 306 aa10.97□□□□□ -0.65
TPM1-212ENST00000558347 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-212ENST00000558347 MTMR11A4FU01 709 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 PES1O00541 588 aaKnown RBP10.96□□□□□ -0.65
TPM1-212ENST00000558347 PI15O43692 258 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 LCA5LO95447 670 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 ITGB3P05106 788 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 PAX3P23760 479 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 CDR1P51861 262 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 VAV2P52735 878 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 DUSP4Q13115 394 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 MAP9Q49MG5 647 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 LMBRD2Q68DH5 695 aaPredicted RBP10.96□□□□□ -0.65
TPM1-212ENST00000558347 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
TPM1-212ENST00000558347 INTS8Q75QN2 995 aaKnown RBP10.96□□□□□ -0.65
TPM1-212ENST00000558347 MTSS1LQ765P7 747 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 CBWD2Q8IUF1 395 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 TTC9BQ8N6N2 239 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 ATAD1Q8NBU5 361 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 CXorf38Q8TB03 319 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 SLC35C1Q96A29 364 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 EXOC4Q96A65 974 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 PNKPQ96T60 521 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 KXD1Q9BQD3 176 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 VIPAS39Q9H9C1 493 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 NHEJ1Q9H9Q4 299 aaPredicted RBP10.96□□□□□ -0.65
TPM1-212ENST00000558347 CA14Q9ULX7 337 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 GUCA1BQ9UMX6 200 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 SAR1BQ9Y6B6 198 aa10.96□□□□□ -0.65
TPM1-212ENST00000558347 COL4A3Q01955 1670 aa10.96□□□□□ -0.66
TPM1-212ENST00000558347 PTPRJQ12913 1337 aa10.96□□□□□ -0.66
TPM1-212ENST00000558347 KPNA7A9QM74 516 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 MOSPD3O75425 235 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 SOAT2O75908 522 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 POLR2BP30876 1174 aaKnown RBP10.95□□□□□ -0.66
TPM1-212ENST00000558347 HOXD11P31277 338 aaPredicted RBP10.95□□□□□ -0.66
TPM1-212ENST00000558347 GPC5P78333 572 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 BFSP1Q12934 665 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 SV2CQ496J9 727 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 SLC39A12Q504Y0 691 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 WSCD1Q658N2 575 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 PDZD4Q76G19 769 aaPredicted RBP10.95□□□□□ -0.66
TPM1-212ENST00000558347 ZNF572Q7Z3I7 529 aaPredicted RBP10.95□□□□□ -0.66
TPM1-212ENST00000558347 TMC2Q8TDI7 906 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 ZNF512Q96ME7 567 aaPredicted RBP10.95□□□□□ -0.66
TPM1-212ENST00000558347 ZNF560Q96MR9 790 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 PRRX2Q99811 253 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 PLA2G2FQ9BZM2 168 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 MTMR12Q9C0I1 747 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 NUCKS1Q9H1E3 243 aaKnown RBP10.95□□□□□ -0.66
TPM1-212ENST00000558347 SLC2A4RGQ9NR83 387 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 GDE1Q9NZC3 331 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 SIX4Q9UIU6 781 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 DSEQ9UL01 958 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 AGAP1Q9UPQ3 857 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 SIK3Q9Y2K2 1263 aa10.95□□□□□ -0.66
TPM1-212ENST00000558347 PMM2O15305 246 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ABL1P00519 1130 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 AFPP02771 609 aaKnown RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 MYL4P12829 197 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 KRT13P13646 458 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 PRLRP16471 622 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 GJA1P17302 382 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 AOC1P19801 751 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 FCARP24071 287 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 CLCN5P51795 746 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 EPHA5P54756 1037 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 PTPN5P54829 565 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 KCNH2Q12809 1159 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 KIF5AQ12840 1032 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 SPA17Q15506 151 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 SNRNP35Q16560 246 aaKnown RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 CYP4A22Q5TCH4 519 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 LRRTM3Q86VH5 581 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ELMOD1Q8N336 334 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 TRIM58Q8NG06 486 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 OR5B17Q8NGF7 314 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 PCMTD1Q96MG8 357 aaPredicted RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ZCWPW1Q9H0M4 648 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 VPS13AQ96RL7 3174 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 GTPBP10A4D1E9 387 aaKnown RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 ZNF233A6NK53 670 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 ZNF197O14709 1029 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
TPM1-212ENST00000558347 MICAL2O94851 1124 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 KRT19P08727 400 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 TMEM191BP0C7N4 346 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 PNPLA4P41247 253 aa10.94□□□□□ -0.66
TPM1-212ENST00000558347 VAMP7P51809 220 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms