RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ZACNQ401N2 412 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 ZNF667Q5HYK9 610 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 STXBP5Q5T5C0 1151 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 INTS8Q75QN2 995 aaKnown RBP10.79□□□□□ -0.68
USP3-207ENST00000558218 ELOA2Q8IYF1 753 aaPredicted RBP10.79□□□□□ -0.68
USP3-207ENST00000558218 SYNPOQ8N3V7 929 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 OR6B3Q8NGW1 331 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 RSPRY1Q96DX4 576 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 FAXDC2Q96IV6 333 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 SLC24A3Q9HC58 644 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 CRTAC1Q9NQ79 661 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 TDP1Q9NUW8 608 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 FAM86C1Q9NVL1 165 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 MTF2Q9Y483 593 aaPredicted RBP10.79□□□□□ -0.68
USP3-207ENST00000558218 PIAS3Q9Y6X2 628 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 PTPRZ1P23471 2315 aaPredicted RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 GOLGA6L4A6NEF3 574 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 LRRIQ3A6PVS8 624 aaPredicted RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 ATP2C2O75185 946 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 PDGFRBP09619 1106 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 USP17L7P0C7H9 530 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 TCF3P15923 654 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 CD72P21854 359 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 ANXA13P27216 316 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 GRIK1P39086 918 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 NOP14P78316 857 aaKnown RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 BIRC3Q13489 604 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 NCOA4Q13772 614 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 EDRF1Q3B7T1 1238 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 DGKKQ5KSL6 1271 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 DENND5BQ6ZUT9 1274 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 SCN4BQ8IWT1 228 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 MAB21L3Q8N8X9 362 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 NELL1Q92832 810 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 EXOC4Q96A65 974 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 PCED1BQ96HM7 432 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 FAM84AQ96KN4 292 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 TNIP3Q96KP6 325 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 TIGD1Q96MW7 591 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 LRRC3BQ96PB8 259 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 GSDMAQ96QA5 445 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 FAM83CQ9BQN1 747 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 MRPL45Q9BRJ2 306 aaKnown RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 TTLL2Q9BWV7 592 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 ELOVL4Q9GZR5 314 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 CHRDQ9H2X0 955 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 SPATA6Q9NWH7 488 aaPredicted RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 RMND1Q9NWS8 449 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 COMMD8Q9NX08 183 aa10.78□□□□□ -0.68
USP3-207ENST00000558218 HOOK1Q9UJC3 728 aaKnown RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
USP3-207ENST00000558218 WDFY4Q6ZS81 3184 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 TRAV19A0A0A6YYK7 116 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 PRR23AA6NEV1 266 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 A8MXQ7 604 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 LRRN2O75325 713 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 ADH1BP00325 375 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 CHRNB1P11230 501 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 TRIM21P19474 475 aaKnown RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 BDNFP23560 247 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 CCNE1P24864 410 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 GTF2H1P32780 548 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 PSMC2P35998 433 aaKnown RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 GPR15P49685 360 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 VAMP7P51809 220 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 KPNA1P52294 538 aaPredicted RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 NRLP54845 237 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 CYP4F8P98187 520 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 CYP27A1Q02318 531 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 FAM160A1Q05DH4 1040 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 ADAM9Q13443 819 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 LRRC32Q14392 662 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 PDGFRLQ15198 375 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 ZNF699Q32M78 642 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 ITPRIPL2Q3MIP1 535 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 COBLL1Q53SF7 1204 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 TDRD10Q5VZ19 366 aaKnown RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 CEP135Q66GS9 1140 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 CC2D1AQ6P1N0 951 aaPredicted RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 SV2AQ7L0J3 742 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 FRMD5Q7Z6J6 570 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 UNC93AQ86WB7 457 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 MAML2Q8IZL2 1156 aaPredicted RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 CRYBG2Q8N1P7 616 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 PLEKHO2Q8TD55 490 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 USP13Q92995 863 aaPredicted RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 MYLPFQ96A32 169 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 DNAI2Q9GZS0 605 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 FAM124BQ9H5Z6 455 aaPredicted RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 LMAN1LQ9HAT1 526 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 GKN1Q9NS71 199 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 PCDHGA2Q9Y5H1 932 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 ZNF638Q14966 1978 aaKnown RBP10.77□□□□□ -0.69
USP3-207ENST00000558218 FANCMQ8IYD8 2048 aa10.77□□□□□ -0.69
USP3-207ENST00000558218 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
USP3-207ENST00000558218 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
USP3-207ENST00000558218 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms