RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 PDXDC1Q6P996 788 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 RIPOR1Q6ZS17 1223 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 OR10T2Q8NGX3 314 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 PPM1EQ8WY54 764 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 RTP3Q9BQQ7 232 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 CLSTN3Q9BQT9 956 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 BCO2Q9BYV7 579 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 XPO4Q9C0E2 1151 aaKnown RBP12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 TLE6Q9H808 572 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 CYP3A43Q9HB55 503 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 SIX2Q9NPC8 291 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 FAM207AQ9NSI2 230 aaPredicted RBP12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 MTRRQ9UBK8 725 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 DNAJC12Q9UKB3 198 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 MTCH2Q9Y6C9 303 aa12.81□□□□□ -0.36
HMGB1P8-201ENST00000558211 GABRDO14764 452 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 ATP2C2O75185 946 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 SPATA31D3P0C874 917 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 TBXAS1P24557 533 aaPredicted RBP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 GTF2F1P35269 517 aaKnown RBP eCLIP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 USP8P40818 1118 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 NDST1P52848 882 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 MFAP3P55082 362 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 PSMC1P62191 440 aaKnown RBP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 UBAP2LQ14157 1087 aaKnown RBP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 CCDC85BQ15834 202 aaPredicted RBP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 TCEAL5Q5H9L2 206 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 LLGL2Q6P1M3 1020 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 SPATA31D4Q6ZUB0 917 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 LIMS2Q7Z4I7 341 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 VWA5B2Q8N398 1253 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 NEK11Q8NG66 645 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 IRF7Q92985 503 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 KREMEN1Q96MU8 473 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 GUCD1Q96NT3 240 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 PGLYRP2Q96PD5 576 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 SYT15Q9BQS2 421 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 DPEP3Q9H4B8 488 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 NSUN3Q9H649 340 aaKnown RBP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 CISHQ9NSE2 258 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 MTMR10Q9NXD2 777 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 APEX2Q9UBZ4 518 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 HMGXB4Q9UGU5 601 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 AJAP1Q9UKB5 411 aaPredicted RBP12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 ZNF232Q9UNY5 417 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 SIK3Q9Y2K2 1263 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 NME7Q9Y5B8 376 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 PCDHB4Q9Y5E5 795 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 BACE2Q9Y5Z0 518 aa12.8□□□□□ -0.36
HMGB1P8-201ENST00000558211 OR6C75A6NL08 312 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 AP5Z1O43299 807 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 TBC1D4O60343 1298 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 CLASP2O75122 1294 aaKnown RBP12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 TPM3P06753 285 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 FAM163BP0C2L3 166 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 KRT5P13647 590 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 FOSL2P15408 326 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 PCSK1P29120 753 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 NDUFV1P49821 464 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 POLR2FP61218 127 aaKnown RBP12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 YWHAEP62258 255 aaKnown RBP12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 TSPY1Q01534 308 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 CREMQ03060 361 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 LBRQ14739 615 aaKnown RBP12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 CCDC142Q17RM4 750 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 IQCEQ6IPM2 695 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 EP400NLQ6ZTU2 488 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 ACOT1Q86TX2 421 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 LRRTM3Q86VH5 581 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 GPR161Q8N6U8 529 aaKnown RBP12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 ERGIC2Q96RQ1 377 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 TWNKQ96RR1 684 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 ACBD6Q9BR61 282 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 RUBCNLQ9H714 662 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 NLRC4Q9NPP4 1024 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 LMCD1Q9NZU5 365 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 FNIP2Q9P278 1114 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 CDH9Q9ULB4 789 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 BARX2Q9UMQ3 279 aaPredicted RBP12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
HMGB1P8-201ENST00000558211 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 WDR27A2RRH5 827 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 MYBPHLA2RUH7 354 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 EPHB6O15197 1021 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 PRMT3O60678 531 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 CILPO75339 1184 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 UCHL3P15374 230 aa12.78□□□□□ -0.36
HMGB1P8-201ENST00000558211 PTPN1P18031 435 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms