RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 VPS33AQ96AX1 596 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 C12orf43Q96C57 262 aaKnown RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 CLPTM1LQ96KA5 538 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 CSRNP1Q96S65 589 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 TRPV6Q9H1D0 765 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 SOX13Q9UN79 622 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 MIF4GDA9UHW6 222 aaKnown RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 PEX1O43933 1283 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 FAM228BP0C875 321 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 SLC9A3P48764 834 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 CD83Q01151 205 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 LRRC63Q05C16 580 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 POU6F1Q14863 301 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 NAB2Q15742 525 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 DGKDQ16760 1214 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 KIAA1841Q6NSI8 718 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF704Q6ZNC4 412 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 CHST3Q7LGC8 479 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 FAM9CQ8IZT9 166 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 SLC25A41Q8N5S1 370 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 ICA1LQ8NDH6 482 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 GLG1Q92896 1179 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 CFAP57Q96MR6 1250 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 FOXP3Q9BZS1 431 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 ROPN1BQ9BZX4 212 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 ROPN1Q9HAT0 212 aaPredicted RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 CD93Q9NPY3 652 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 RIC8BQ9NVN3 520 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 DAPK2Q9UIK4 370 aa11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 RTCBQ9Y3I0 505 aaKnown RBP11.49□□□□□ -0.57
SEMA4B-204ENST00000558065 H0YC42 278 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 NUAK1O60285 661 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ATE1O95260 518 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 GH2P01242 217 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 S100A6P06703 90 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 KLRC1P26715 233 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 PSMC2P35998 433 aaKnown RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ECE1P42892 770 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 GPD2P43304 727 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TPD52P55327 224 aaPredicted RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 PPM1LQ5SGD2 360 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 PYDC1Q8WXC3 89 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TRIB2Q92519 343 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 SECISBP2Q96T21 854 aaKnown RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 PXDNLA1KZ92 1463 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TNRQ92752 1358 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 DCCP43146 1447 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 IQANK1A0A1B0GTG1 560 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 KRIT1O00522 736 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 PI15O43692 258 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TSPAN7P41732 249 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 GPR85P60893 370 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 LRIT3Q3SXY7 679 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 LEXMQ3ZCV2 418 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 MAML1Q92585 1016 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 KRT35Q92764 455 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 C1QTNF7Q9BXJ2 289 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TXNDC16Q9P2K2 825 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 RETP07949 1114 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ATF6P18850 670 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 HOXC13P31276 330 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 MAPRE2Q15555 327 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 KCNT1Q5JUK3 1230 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 RRAGBQ5VZM2 374 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ULK2Q8IYT8 1036 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF512Q96ME7 567 aaPredicted RBP11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 TUBB6Q9BUF5 446 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 CACNA1FO60840 1977 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 FRMPD1Q5SYB0 1578 aa11.48□□□□□ -0.57
SEMA4B-204ENST00000558065 NDUFS2O75306 463 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 TM7SF2O76062 418 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 DDX58O95786 925 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 TOB1P50616 345 aaPredicted RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 ARHGAP4P98171 946 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SNAP47Q5SQN1 464 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SH3KBP1Q96B97 665 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 SETBP1Q9Y6X0 1596 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 ZNF609O15014 1411 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 MYH14Q7Z406 1995 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 EPHB6O15197 1021 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 CRTAMO95727 393 aa11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 DBTP11182 482 aaKnown RBP11.47□□□□□ -0.57
SEMA4B-204ENST00000558065 KRT5P13647 590 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms