RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 POLR2FP61218 127 aaKnown RBP27.05■■□□□ 1.92
SMAD6-202ENST00000557916 ZP2Q05996 745 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 GOLGA7BQ2TAP0 167 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 ANKRD52Q8NB46 1076 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 ACSF2Q96CM8 615 aaPredicted RBP27.05■■□□□ 1.92
SMAD6-202ENST00000557916 STK33Q9BYT3 514 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 HESX1Q9UBX0 185 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 DAAM1Q9Y4D1 1078 aa27.05■■□□□ 1.92
SMAD6-202ENST00000557916 TCF20Q9UGU0 1960 aaKnown RBP27.04■■□□□ 1.92
SMAD6-202ENST00000557916 O00370 1275 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 FGF19O95750 216 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 NPR3P17342 541 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 GABRR2P28476 465 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 PTPN21Q16825 1174 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 ADAMTS19Q8TE59 1207 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 ING5Q8WYH8 240 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 TRMT2BQ96GJ1 504 aaKnown RBP27.04■■□□□ 1.92
SMAD6-202ENST00000557916 MYRFLQ96LU7 910 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 ZSWIM1Q9BR11 485 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 GPR88Q9GZN0 384 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 UXTQ9UBK9 157 aaPredicted RBP27.04■■□□□ 1.92
SMAD6-202ENST00000557916 NOTCH4Q99466 2003 aa27.04■■□□□ 1.92
SMAD6-202ENST00000557916 DENND4AQ7Z401 1863 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 C2CD4DB7Z1M9 353 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 CYP26A1O43174 497 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 MICAL2O94851 1124 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 PNMA6AP0CW24 399 aaPredicted RBP27.03■■□□□ 1.92
SMAD6-202ENST00000557916 STILQ15468 1287 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 CNGA2Q16280 664 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 LCLAT1Q6UWP7 414 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 GAREM2Q75VX8 874 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 TTC30AQ86WT1 665 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 FAM71AQ8IYT1 594 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 NUP93Q8N1F7 819 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 TDRD5Q8NAT2 981 aaKnown RBP27.03■■□□□ 1.92
SMAD6-202ENST00000557916 FGF13Q92913 245 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 MYADMQ96S97 322 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 IL21Q9HBE4 155 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 NLRC4Q9NPP4 1024 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 EHD2Q9NZN4 543 aa27.03■■□□□ 1.92
SMAD6-202ENST00000557916 A0A1W2PQC6 194 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 A0A1W2PRU2 124 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 LOC730098B7Z3J9 87 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 MOSPD3O75425 235 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 GJA1P17302 382 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 CEBPBP17676 345 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 GNA15P30679 374 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 SLC8A3P57103 927 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 USP46P62068 366 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 SHKBP1Q8TBC3 707 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 ATXN3LQ9H3M9 355 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 ACP6Q9NPH0 428 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 IFNKQ9P0W0 207 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 CDH7Q9ULB5 785 aa27.02■■□□□ 1.92
SMAD6-202ENST00000557916 F8VZ95 297 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 NRG2O14511 850 aaPredicted RBP27.01■■□□□ 1.91
SMAD6-202ENST00000557916 TNFRSF10BO14763 440 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 CDC25CP30307 473 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 BCAT1P54687 386 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 PTK2Q05397 1052 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 NPAS3Q8IXF0 933 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 NECAB3Q96P71 396 aaPredicted RBP27.01■■□□□ 1.91
SMAD6-202ENST00000557916 GCNAQ96QF7 691 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 ANP32EQ9BTT0 268 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 TTLL2Q9BWV7 592 aa27.01■■□□□ 1.91
SMAD6-202ENST00000557916 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.01■■□□□ 1.91
SMAD6-202ENST00000557916 C19orf67A6NJJ6 358 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 THAP12O43422 761 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 RTN3O95197 1032 aaPredicted RBP27■■□□□ 1.91
SMAD6-202ENST00000557916 F11P03951 625 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 CLCN1P35523 988 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 SLC5A3P53794 718 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 IFRD2Q12894 506 aaPredicted RBP27■■□□□ 1.91
SMAD6-202ENST00000557916 TEAD2Q15562 447 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 PLCD3Q8N3E9 789 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 UBA3Q8TBC4 463 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 ZNF606Q8WXB4 792 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 SPAG5Q96R06 1193 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 PNPLA8Q9NP80 782 aa27■■□□□ 1.91
SMAD6-202ENST00000557916 ZFP37Q9Y6Q3 630 aaPredicted RBP27■■□□□ 1.91
SMAD6-202ENST00000557916 HHLA1C9JL84 531 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 MED7O43513 233 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 LAMP2P13473 410 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 SSTR3P32745 418 aaPredicted RBP26.99■■□□□ 1.91
SMAD6-202ENST00000557916 BPIFB4P59827 614 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 PDE4CQ08493 712 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 BST2Q10589 180 aaKnown RBP26.99■■□□□ 1.91
SMAD6-202ENST00000557916 TMEM150AQ86TG1 271 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 SCAMP5Q8TAC9 235 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 MCRS1Q96EZ8 462 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 UHRF1Q96T88 793 aaPredicted RBP26.99■■□□□ 1.91
SMAD6-202ENST00000557916 UBXN6Q9BZV1 441 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 GDE1Q9NZC3 331 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 EPS15L1Q9UBC2 864 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 M0QYV0 167 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 YWHAQP27348 245 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 JAM2P57087 298 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 PKDCCQ504Y2 493 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 ZDHHC14Q8IZN3 488 aa26.99■■□□□ 1.91
SMAD6-202ENST00000557916 COMMD8Q9NX08 183 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms