RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TTPALQ9BTX7 342 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 MRI1Q9BV20 369 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 ZCWPW1Q9H0M4 648 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TMLHEQ9NVH6 421 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TAS2R10Q9NYW0 307 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TBC1D14Q9P2M4 693 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CNOT7Q9UIV1 285 aaKnown RBP4.2□□□□□ -1.74
TDP1-217ENST00000557782 ACAD8Q9UKU7 415 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 HSF4Q9ULV5 492 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CAMK2AQ9UQM7 478 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 HPSEQ9Y251 543 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 SLC5A6Q9Y289 635 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 ZNF711Q9Y462 761 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A18PA6NE21 464 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A16PA6NEW6 464 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A9PA6NNJ1 464 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SMTNL1A8MU46 457 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A5PA8MXJ8 464 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 STX16-NPEPL1H3BU86 382 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ABLIM1O14639 778 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 STX16O14662 325 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SEPT4O43236 478 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 KLK10O43240 276 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 RRP9O43818 475 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 TBCAO75347 108 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 CCNDBP1O95273 360 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 HSPA4LO95757 839 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 BAG2O95816 211 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 MLYCDO95822 493 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 AMHP03971 560 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 C8BP07358 591 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CLTBP09497 229 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SNRPA1P09661 255 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A15PP0C7V4 464 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM90A14PP0C7W9 464 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CSH1P0DML2 217 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CSH2P0DML3 217 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CD8BP10966 210 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 LAMP2P13473 410 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CPA1P15085 419 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 TRHRP34981 398 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 GDNFP39905 211 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 NNMTP40261 264 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ETV4P43268 484 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CDK7P50613 346 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ERVFC1P60507 584 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 KRT17Q04695 432 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 EPS8Q12929 822 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ADAM15Q13444 863 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SMAD4Q13485 552 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 CSHL1Q14406 222 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 KCNAB1Q14722 419 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 GRM4Q14833 912 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ZNF750Q32MQ0 723 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 OLFML2BQ68BL8 750 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 MCTP2Q6DN12 878 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 GPR139Q6DWJ6 353 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 DGAT2L7PQ6IED9 249 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 NAA16Q6N069 864 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 ZNF529Q6P280 563 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 H1FNTQ75WM6 255 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 SRBD1Q8N5C6 995 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 ANKRD44Q8N8A2 993 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 NFKBIDQ8NI38 313 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ETNPPLQ8TBG4 499 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 HMGB4Q8WW32 186 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 STAMQ92783 540 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SLC7A6OSQ96CW6 309 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM120BQ96EK7 910 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 ZNF668Q96K58 619 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 FAM227BQ96M60 508 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ZSWIM3Q96MP5 696 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 MXD3Q9BW11 206 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ITPAQ9BY32 194 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 KATNBL1Q9H079 304 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 VEZTQ9HBM0 779 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ERVK-5Q9HDB9 667 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SEPT11Q9NVA2 429 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 HESX1Q9UBX0 185 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CHORDC1Q9UHD1 332 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 SLC23A1Q9UHI7 598 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 KCND3Q9UK17 655 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CROTQ9UKG9 612 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ZNF215Q9UL58 517 aaPredicted RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 ISY1Q9ULR0 285 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 SUFUQ9UMX1 484 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 PCDHGB4Q9UN71 923 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 AGAP1Q9UPQ3 857 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 SMG5Q9UPR3 1016 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 SHOC2Q9UQ13 582 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CNTN6Q9UQ52 1028 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 ATP11BQ9Y2G3 1177 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 TBC1D30Q9Y2I9 924 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 RBM8AQ9Y5S9 174 aaKnown RBP4.19□□□□□ -1.74
TDP1-217ENST00000557782 SNX5Q9Y5X3 404 aa4.19□□□□□ -1.74
TDP1-217ENST00000557782 CXorf49A8MYA2 514 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 ZSCAN9O15535 394 aaPredicted RBP4.18□□□□□ -1.74
TDP1-217ENST00000557782 TOX4O94842 621 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 KIF20AO95235 890 aa4.18□□□□□ -1.74
TDP1-217ENST00000557782 RASAL1O95294 804 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms