RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 SIAH2O43255 324 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 CALCAP01258 141 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 PNMA6AP0CW24 399 aaPredicted RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 HAPLN1P10915 354 aaPredicted RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 KCNA5P22460 613 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 TBXAS1P24557 533 aaPredicted RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 CYP2F1P24903 491 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 GPR15P49685 360 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 JAM2P57087 298 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 FANCCQ00597 558 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 TSPY1Q01534 308 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 CETN1Q12798 172 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 SYCP1Q15431 976 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 UVSSAQ2YD98 709 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 LEXMQ3ZCV2 418 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 MDH1BQ5I0G3 518 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 DCP1BQ8IZD4 617 aaKnown RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 RNF214Q8ND24 703 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 ZMIZ2Q8NF64 920 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 SPPL2BQ8TCT7 592 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 C2orf15Q8WU43 125 aaKnown RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 TFAP2BQ92481 460 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 JAKMIP2Q96AA8 810 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 FUBP3Q96I24 572 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD8-214ENST00000557727 LSM14BQ9BX40 385 aaKnown RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 NT5C1AQ9BXI3 368 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 ZNF518BQ9C0D4 1074 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 TTYH3Q9C0H2 523 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 SFXN1Q9H9B4 322 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 UBE2TQ9NPD8 197 aaPredicted RBP9.59□□□□□ -0.87
CHD8-214ENST00000557727 ACP6Q9NPH0 428 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 ZDHHC7Q9NXF8 308 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 YIPF1Q9Y548 306 aa9.59□□□□□ -0.87
CHD8-214ENST00000557727 MBTPS2O43462 519 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 BEST1O76090 585 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 HNRNPA1P09651 372 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHD8-214ENST00000557727 CCDC130P13994 396 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 UCHL3P15374 230 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 HOXB8P17481 243 aaPredicted RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 CDK11BP21127 795 aaKnown RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 MAGEA11P43364 429 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 SMARCB1Q12824 385 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 CLUL1Q15846 466 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 NFE2Q16621 373 aaPredicted RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 ZNF394Q53GI3 561 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 RARS2Q5T160 578 aaKnown RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 ARHGAP17Q68EM7 881 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 PTCRAQ6ISU1 281 aaPredicted RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 TMC5Q6UXY8 1006 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 RTL10Q7L3V2 364 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 GPR149Q86SP6 731 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 FAM35AQ86V20 835 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 TMC8Q8IU68 726 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 CCDC150Q8NCX0 1101 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 STKLD1Q8NE28 680 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 OLIG1Q8TAK6 271 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 TMEM176AQ96HP8 235 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 APOL5Q9BWW9 433 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 ADAM7Q9H2U9 754 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 CYP4F11Q9HBI6 524 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 HCFC1R1Q9NWW0 138 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 ABI2Q9NYB9 513 aaPredicted RBP9.58□□□□□ -0.88
CHD8-214ENST00000557727 CD207Q9UJ71 328 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 DNAJC12Q9UKB3 198 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 COG5Q9UP83 839 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 PCDHB5Q9Y5E4 795 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 CUL9Q8IWT3 2517 aa9.58□□□□□ -0.88
CHD8-214ENST00000557727 MUC3AQ02505 3323 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 CCDC195A0A1B0GUA6 201 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 A0A1W2PQC6 194 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 O00370 1275 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 FOXN3O00409 490 aaPredicted RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 TNFRSF10BO14763 440 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 CCL16O15467 120 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 MOSPD3O75425 235 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 HMGA1P17096 107 aaKnown RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 BDNFP23560 247 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 CCR2P41597 374 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 KCNQ1P51787 676 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 EPHA5P54756 1037 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 UBXN1Q04323 297 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 TWF1Q12792 350 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 SMAD4Q13485 552 aaKnown RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 MAPRE1Q15691 268 aaKnown RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 SLC5A9Q2M3M2 681 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 PPP1R26Q5T8A7 1209 aaPredicted RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 SDHAF4Q5VUM1 108 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 TMEM270Q6UE05 265 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 CCDC149Q6ZUS6 474 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 ENOSF1Q7L5Y1 443 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 TMEM150AQ86TG1 271 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 TTC30AQ86WT1 665 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 FAM71AQ8IYT1 594 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 TTC39CQ8N584 583 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 RBBP8NLQ8NC74 664 aaPredicted RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 SLC2A14Q8TDB8 520 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 BAP1Q92560 729 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms