RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KRT82Q9NSB4 513 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 IGSF9Q9P2J2 1179 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 C2orf16Q68DN1 1984 aa14.49□□□□□ -0.09
SHMT2-234ENST00000557703 SLC38A8A6NNN8 435 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 O00370 1275 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 CBFA2T2O43439 604 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 LAMP2P13473 410 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 KRT5P13647 590 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 CD19P15391 556 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 PSEN1P49768 467 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 UBASH3AP57075 661 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 SNX16P57768 344 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 FANCCQ00597 558 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 BST2Q10589 180 aaKnown RBP14.48□□□□□ -0.09
SHMT2-234ENST00000557703 SYCP1Q15431 976 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 FIGNQ5HY92 759 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 SNX30Q5VWJ9 437 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 CLEC20AQ6ZU45 233 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 SCML4Q8N228 414 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 KIAA1958Q8N8K9 716 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 HSFY1Q96LI6 401 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
SHMT2-234ENST00000557703 TRPV4Q9HBA0 871 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 CYLDQ9NQC7 956 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 FAM49BQ9NUQ9 324 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 BDP1A6H8Y1 2624 aa14.48□□□□□ -0.09
SHMT2-234ENST00000557703 DOCK8Q8NF50 2099 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 DENND4AQ7Z401 1863 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 CLDN5O00501 218 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 TNFRSF10BO14763 440 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 XPO1O14980 1071 aaKnown RBP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 F11P03951 625 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 CCDC130P13994 396 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 YWHAQP27348 245 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 TUBP50607 506 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 DRAP1Q14919 205 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 ARHGAP44Q17R89 818 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 ZNF677Q86XU0 584 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 GJD3Q8N144 294 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 ZNF276Q8N554 614 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 ADAMTS19Q8TE59 1207 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 KCTD13Q8WZ19 329 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 MRPS31Q92665 395 aaKnown RBP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 FGF13Q92913 245 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 KAT5Q92993 513 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 SPAG5Q96R06 1193 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 CDK5RAP1Q96SZ6 601 aaKnown RBP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 SMOQ99835 787 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 LPIN3Q9BQK8 851 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 NUCKS1Q9H1E3 243 aaKnown RBP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 GANQ9H2C0 597 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 LHX5Q9H2C1 402 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 TASP1Q9H6P5 420 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 TRPM5Q9NZQ8 1165 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 TSPAN16Q9UKR8 245 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 PCDHGC3Q9UN70 934 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.47□□□□□ -0.09
SHMT2-234ENST00000557703 DOCK6Q96HP0 2047 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 NOTCH4Q99466 2003 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 MYH10P35580 1976 aa14.47□□□□□ -0.09
SHMT2-234ENST00000557703 RNF225M0QZC1 329 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-234ENST00000557703 FOXN3O00409 490 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-234ENST00000557703 SOAT2O75908 522 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 MYL4P12829 197 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 GABRR2P28476 465 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 ADORA2BP29275 332 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 GNA15P30679 374 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 GBP2P32456 591 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-234ENST00000557703 STAT1P42224 750 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 ACADSBP45954 432 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 PLA2G4AP47712 749 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 KIF11P52732 1056 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 MAP3K7CLP57077 242 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 RAPGEF1Q13905 1077 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 GAREM2Q75VX8 874 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 ARHGAP18Q8N392 663 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 STKLD1Q8NE28 680 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 GIPC2Q8TF65 315 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 ZNF606Q8WXB4 792 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 RPGRIP1Q96KN7 1286 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 KCNK16Q96T55 309 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 UHRF1Q96T88 793 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-234ENST00000557703 ATXN3LQ9H3M9 355 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 IL21Q9HBE4 155 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 FAM207AQ9NSI2 230 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-234ENST00000557703 HCFC1R1Q9NWW0 138 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 OBP2AQ9NY56 170 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 SCML2Q9UQR0 700 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 CEP83Q9Y592 693 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 FHOD1Q9Y613 1164 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 USP3Q9Y6I4 520 aa14.46□□□□□ -0.09
SHMT2-234ENST00000557703 C5orf42Q9H799 3197 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 CUL9Q8IWT3 2517 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 ANHXE9PGG2 379 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 F8VZ95 297 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 SART1O43290 800 aaKnown RBP14.45□□□□□ -0.1
SHMT2-234ENST00000557703 KRT9P35527 623 aa14.45□□□□□ -0.1
SHMT2-234ENST00000557703 USP8P40818 1118 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms