RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CHD8Q9HCK8 2581 aa17.78■□□□□ 0.44
NEK9-211ENST00000557673 RALGAPA1Q6GYQ0 2036 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 TRDMT1O14717 391 aaKnown RBP17.77■□□□□ 0.44
NEK9-211ENST00000557673 KRT19P08727 400 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 TMEM191BP0C7N4 346 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 KCNA4P22459 653 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 PNPLA4P41247 253 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 CASP4P49662 377 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 PSMD6Q15008 389 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 ANKRD40Q6AI12 368 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 TTI2Q6NXR4 508 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 CSGALNACT2Q8N6G5 542 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 OR5B17Q8NGF7 314 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 GIPC2Q8TF65 315 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 NELFBQ8WX92 580 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 SYAP1Q96A49 352 aaPredicted RBP17.77■□□□□ 0.44
NEK9-211ENST00000557673 GZF1Q9H116 711 aaPredicted RBP17.77■□□□□ 0.44
NEK9-211ENST00000557673 TDP1Q9NUW8 608 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 INTS13Q9NVM9 706 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 ABI2Q9NYB9 513 aaPredicted RBP17.77■□□□□ 0.44
NEK9-211ENST00000557673 SIX4Q9UIU6 781 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 ANGPTL2Q9UKU9 493 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 ITGA11Q9UKX5 1188 aa17.77■□□□□ 0.44
NEK9-211ENST00000557673 NUP210Q8TEM1 1887 aaPredicted RBP17.77■□□□□ 0.43
NEK9-211ENST00000557673 MAPK13O15264 365 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 EPN2O95208 641 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 HAPLN1P10915 354 aaPredicted RBP17.76■□□□□ 0.43
NEK9-211ENST00000557673 DRD1P21728 446 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 RPL13P26373 211 aaKnown RBP17.76■□□□□ 0.43
NEK9-211ENST00000557673 RAP1GAPP47736 663 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 NLRP12P59046 1061 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 TSPY1Q01534 308 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 SURF1Q15526 300 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 FBXO43Q4G163 708 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 CEP135Q66GS9 1140 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 LRRC52Q8N7C0 313 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 MAB21L3Q8N8X9 362 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 MLKLQ8NB16 471 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 RDH13Q8NBN7 331 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 MRPS31Q92665 395 aaKnown RBP17.76■□□□□ 0.43
NEK9-211ENST00000557673 CGRRF1Q99675 332 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 SMG9Q9H0W8 520 aaKnown RBP17.76■□□□□ 0.43
NEK9-211ENST00000557673 PCDHB5Q9Y5E4 795 aa17.76■□□□□ 0.43
NEK9-211ENST00000557673 BICDL2A1A5D9 508 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 CSH1P0DML2 217 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 CSH2P0DML3 217 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 RBP5P82980 135 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 PDGFRLQ15198 375 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 NFE2Q16621 373 aaPredicted RBP17.75■□□□□ 0.43
NEK9-211ENST00000557673 LRRTM3Q86VH5 581 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 WDR49Q8IV35 697 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 PDCL2Q8N4E4 241 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 PLEKHO2Q8TD55 490 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 USP13Q92995 863 aaPredicted RBP17.75■□□□□ 0.43
NEK9-211ENST00000557673 ANKRD36BP1Q96IX9 119 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 ZC3H10Q96K80 434 aaKnown RBP17.75■□□□□ 0.43
NEK9-211ENST00000557673 DUSP9Q99956 384 aaKnown RBP17.75■□□□□ 0.43
NEK9-211ENST00000557673 EBF3Q9H4W6 596 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 UXTQ9UBK9 157 aaPredicted RBP17.75■□□□□ 0.43
NEK9-211ENST00000557673 L1RE1Q9UN81 338 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 FRMD4BQ9Y2L6 1034 aa17.75■□□□□ 0.43
NEK9-211ENST00000557673 CNOT1A5YKK6 2376 aaKnown RBP17.75■□□□□ 0.43
NEK9-211ENST00000557673 MAP1BP46821 2468 aaKnown RBP17.74■□□□□ 0.43
NEK9-211ENST00000557673 CETN3O15182 167 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 SLC16A3O15427 465 aaKnown RBP17.74■□□□□ 0.43
NEK9-211ENST00000557673 F11P03951 625 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 DLATP10515 647 aaKnown RBP17.74■□□□□ 0.43
NEK9-211ENST00000557673 STX17P56962 302 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 FKBP3Q00688 224 aaKnown RBP17.74■□□□□ 0.43
NEK9-211ENST00000557673 ADAM9Q13443 819 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 ZNF268Q14587 947 aaPredicted RBP17.74■□□□□ 0.43
NEK9-211ENST00000557673 SF3A2Q15428 464 aaKnown RBP17.74■□□□□ 0.43
NEK9-211ENST00000557673 FSTL4Q6MZW2 842 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 KBTBD6Q86V97 674 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 MON1AQ86VX9 555 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 FAM186BQ8IYM0 893 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 CCDC26Q8TAB7 109 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 CCDC127Q96BQ5 260 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 EEF2KMTQ96G04 330 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 HPS4Q9NQG7 708 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 VPS45Q9NRW7 570 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 DACH1Q9UI36 760 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 RWDD2AQ9UIY3 292 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 SNX9Q9Y5X1 595 aa17.74■□□□□ 0.43
NEK9-211ENST00000557673 HUS1O60921 280 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 TNNC2P02585 160 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 HMGA1P17096 107 aaKnown RBP17.73■□□□□ 0.43
NEK9-211ENST00000557673 PSMC2P35998 433 aaKnown RBP17.73■□□□□ 0.43
NEK9-211ENST00000557673 PXNP49023 591 aaPredicted RBP17.73■□□□□ 0.43
NEK9-211ENST00000557673 RPL10AP62906 217 aaKnown RBP17.73■□□□□ 0.43
NEK9-211ENST00000557673 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 ELF2Q15723 593 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 DUOXA2Q1HG44 320 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 PLA2G2CQ5R387 149 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 STPG1Q5TH74 334 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 INTS8Q75QN2 995 aaKnown RBP17.73■□□□□ 0.43
NEK9-211ENST00000557673 TMEM150AQ86TG1 271 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 OSTM1Q86WC4 334 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 CPA6Q8N4T0 437 aa17.73■□□□□ 0.43
NEK9-211ENST00000557673 PARD3BQ8TEW8 1205 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms