RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 POSTNQ15063 836 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 MCTP1Q6DN14 999 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 JADE1Q6IE81 842 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 TXNDC11Q6PKC3 985 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.35□□□□□ -0.91
VRK1-206ENST00000557222 NLRP8Q86W28 1048 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 DCP1BQ8IZD4 617 aaKnown RBP9.35□□□□□ -0.91
VRK1-206ENST00000557222 MYCT1Q8N699 235 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 NUP210Q8TEM1 1887 aaPredicted RBP9.35□□□□□ -0.91
VRK1-206ENST00000557222 LRRC3BQ96PB8 259 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 TMEM209Q96SK2 561 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 FAM83CQ9BQN1 747 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 REEP2Q9BRK0 252 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 ZCCHC2Q9C0B9 1178 aaKnown RBP9.35□□□□□ -0.91
VRK1-206ENST00000557222 KIF9Q9HAQ2 790 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.35□□□□□ -0.91
VRK1-206ENST00000557222 LAMA1P25391 3075 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 NPHP3-ACAD11A0A0J9YXS1 232 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 A0A1W2PNR3 127 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 K7ENM7 598 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 CYB561D2O14569 222 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 PPEF2O14830 753 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 ZNF806P0C7X5 589 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 HAPLN1P10915 354 aaPredicted RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 LONP1P36776 959 aaKnown RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 PNPLA4P41247 253 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 RAP1GAPP47736 663 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 SOX9P48436 509 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 TAF6P49848 677 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 GUCY2FP51841 1108 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 GRSF1Q12849 480 aaKnown RBP eCLIP9.34□□□□□ -0.91
VRK1-206ENST00000557222 ZNF268Q14587 947 aaPredicted RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 PON2Q15165 354 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 TAF12Q16514 161 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 LPAL2Q16609 132 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 NFE2Q16621 373 aaPredicted RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 MGAT5BQ3V5L5 792 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 FBXO43Q4G163 708 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 SLC39A12Q504Y0 691 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 ARSJQ5FYB0 599 aaPredicted RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 TMEM196Q5HYL7 178 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 STXBP5Q5T5C0 1151 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 CEP68Q76N32 757 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 GPBP1Q86WP2 473 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 CMTM8Q8IZV2 173 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 CAMKK1Q8N5S9 505 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 OR10T2Q8NGX3 314 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 SPATA18Q8TC71 538 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 ZDHHC1Q8WTX9 485 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 GAB3Q8WWW8 586 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 HVCN1Q96D96 273 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 ZC3H10Q96K80 434 aaKnown RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 FIZ1Q96SL8 496 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 SLC46A2Q9BY10 475 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 RBM12Q9NTZ6 932 aaKnown RBP9.34□□□□□ -0.91
VRK1-206ENST00000557222 GTSE1Q9NYZ3 720 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 PCDHGC4Q9Y5F7 938 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 PCDHGA5Q9Y5G8 931 aa9.34□□□□□ -0.91
VRK1-206ENST00000557222 H3BQV1 296 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 OIP5O43482 229 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 TBCAO75347 108 aaKnown RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 EPN2O95208 641 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 IL18RAPO95256 599 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 PRAMEF12O95522 483 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 NFICP08651 508 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 CSH1P0DML2 217 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 CSH2P0DML3 217 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 ATF6P18850 670 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 DRD1P21728 446 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 DDIT3P35638 169 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 AVPR1AP37288 418 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 CTBSQ01459 385 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 DMWDQ09019 674 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 RUNX3Q13761 415 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 PDGFRLQ15198 375 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 RABEP1Q15276 862 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 SV2CQ496J9 727 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 PPM1JQ5JR12 505 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 ADALQ6DHV7 355 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 SLC39A4Q6P5W5 647 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 Q6ZS52 159 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 MON1AQ86VX9 555 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 SLC9A9Q8IVB4 645 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 TTC9BQ8N6N2 239 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 CCDC26Q8TAB7 109 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 LEO1Q8WVC0 666 aaPredicted RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 RAD54LQ92698 747 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 SCARF2Q96GP6 870 aaPredicted RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 ZFYVE19Q96K21 471 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 PLIN2Q99541 437 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 SEPT5Q99719 369 aaPredicted RBP9.33□□□□□ -0.92
VRK1-206ENST00000557222 LPIN3Q9BQK8 851 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 ABCB6Q9NP58 842 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 GKN1Q9NS71 199 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 BLOC1S4Q9NUP1 217 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 TDP1Q9NUW8 608 aa9.33□□□□□ -0.92
VRK1-206ENST00000557222 DPP3Q9NY33 737 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms