RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 PLEKHO1Q53GL0 409 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 HECTD2Q5U5R9 776 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 TSHZ3Q63HK5 1081 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ZNF772Q68DY9 489 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ZNF530Q6P9A1 599 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 GADL1Q6ZQY3 521 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 CATIPQ7Z7H3 387 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ERC1Q8IUD2 1116 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 MAPKAPK5Q8IW41 473 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 CPA6Q8N4T0 437 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ASB10Q8WXI3 467 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ANKRD7Q92527 254 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 HSPBAP1Q96EW2 488 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 CLPTM1LQ96KA5 538 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 NUP62CLQ9H1M0 184 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ALDH8A1Q9H2A2 487 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 TTC12Q9H892 705 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 SYNPO2LQ9H987 977 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 PDRG1Q9NUG6 133 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 CGNQ9P2M7 1197 aaKnown RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 TCEAL9Q9UHQ7 104 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 PAXBP1Q9Y5B6 917 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 PCDHB1Q9Y5F3 818 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 LRRFIP2Q9Y608 721 aaKnown RBP5.36□□□□□ -1.55
ATXN3-246ENST00000557030 HEG1Q9ULI3 1381 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 OVOS2A0A0G2JMS6 1433 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 KIF1AQ12756 1690 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 ADAMTS7Q9UKP4 1686 aa5.36□□□□□ -1.55
ATXN3-246ENST00000557030 CACNA1FO60840 1977 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 TUBGCP6Q96RT7 1819 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 SIPA1L3O60292 1781 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-246ENST00000557030 COL18A1P39060 1754 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 ADCY9O60503 1353 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 NPHP3Q7Z494 1330 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 A0A1B0GTW7 788 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 CDHR4A6H8M9 788 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 GOLGA6L4A6NEF3 574 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 SURF6O75683 361 aaKnown RBP5.35□□□□□ -1.55
ATXN3-246ENST00000557030 HLA-DOAP06340 250 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 PF4V1P10720 104 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 CASTP20810 708 aaKnown RBP5.35□□□□□ -1.55
ATXN3-246ENST00000557030 GJB2P29033 226 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 SLC6A4P31645 630 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 CTXN1P60606 82 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 GABPB1Q06547 395 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-246ENST00000557030 FSTL1Q12841 308 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 FOXI1Q12951 378 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 ATP2B3Q16720 1220 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 AMOTQ4VCS5 1084 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 BEND3Q5T5X7 828 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 ABHD17BQ5VST6 288 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 RUFY3Q7L099 469 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 CREBRFQ8IUR6 639 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 IFI44Q8TCB0 444 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 NACC2Q96BF6 587 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 BOD1Q96IK1 185 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 ZSWIM1Q9BR11 485 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 RTFDC1Q9BY42 306 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-246ENST00000557030 GSTO2Q9H4Y5 243 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 HYPKQ9NX55 129 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 OGFRQ9NZT2 677 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-246ENST00000557030 MTMR6Q9Y217 621 aa5.35□□□□□ -1.55
ATXN3-246ENST00000557030 RGPD5Q99666 1765 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 PHLPP1O60346 1717 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 AFF2P51816 1311 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 VPS37CA5D8V6 355 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 LRRC14BA6NHZ5 514 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 UNC119BA6NIH7 251 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 KIF2AO00139 706 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 GRM6O15303 877 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 CTAGE5O15320 804 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 TSPAN6O43657 245 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 SGTAO43765 313 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 CDKL5O76039 1030 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 ANXA1P04083 346 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 CD1AP06126 327 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 SBK3P0C264 359 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 ALAS1P13196 640 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 EIF2S2P20042 333 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 FGFR4P22455 802 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 FXR1P51114 621 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 SEC24CP53992 1094 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 NANOS3P60323 173 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 MTX1Q13505 466 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 PPP2R5AQ15172 486 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 PROSER3Q2NL68 480 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 TMEM240Q5SV17 173 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 RBM43Q6ZSC3 357 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 CERS3Q8IU89 383 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 UNC5CLQ8IV45 518 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 CLASRPQ8N2M8 674 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 Q8NA96 180 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 TDRD7Q8NHU6 1098 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 DDX17Q92841 729 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 EVI5LQ96CN4 794 aa5.34□□□□□ -1.55
ATXN3-246ENST00000557030 JAKMIP1Q96N16 626 aaKnown RBP5.34□□□□□ -1.55
ATXN3-246ENST00000557030 ZNF830Q96NB3 372 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms