RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 NUSAP1Q9BXS6 441 aaKnown RBP9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 ST6GALNAC4Q9H4F1 302 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 SLC32A1Q9H598 525 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 ZDHHC4Q9NPG8 344 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 EVLQ9UI08 416 aaPredicted RBP9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 KLK13Q9UKR3 277 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 NEUROG3Q9Y4Z2 214 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 SNX9Q9Y5X1 595 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 PTPRDP23468 1912 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 ANAPC1Q9H1A4 1944 aa9.68□□□□□ -0.86
HNRNPC-227ENST00000556897 DSPP15924 2871 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 CELSR3Q9NYQ7 3312 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 ATXN2Q99700 1313 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SGK1O00141 431 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 LEFTY2O00292 366 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 TNFRSF10BO14763 440 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 GABRDO14764 452 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SLC26A4O43511 780 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 ATP2C2O75185 946 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 KLF8O95600 359 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 CYP17A1P05093 508 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 KRT19P08727 400 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 TCF3P15923 654 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 ENGP17813 658 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 TIE1P35590 1138 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 P2RY2P41231 377 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SLC6A11P48066 632 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 USP46P62068 366 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SIM1P81133 766 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 MRPS21P82921 87 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 GRIN1Q05586 938 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 KCNA1Q09470 495 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 MESP2Q0VG99 397 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 POSTNQ15063 836 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 LRSAM1Q6UWE0 723 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 ZNF720Q7Z2F6 126 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 FILIP1Q7Z7B0 1213 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SFR1Q86XK3 245 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SYT12Q8IV01 421 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 ADGRF2Q8IZF7 708 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 CSGALNACT2Q8N6G5 542 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 LRRC52Q8N7C0 313 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 IL17RCQ8NAC3 791 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 TXNDC5Q8NBS9 432 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 CXorf38Q8TB03 319 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 WHAMMQ8TF30 809 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 HMGB4Q8WW32 186 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SAAL1Q96ER3 474 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 FUBP3Q96I24 572 aaKnown RBP eCLIP9.67□□□□□ -0.869e-8■■□□□ 14.1
HNRNPC-227ENST00000556897 SPACA7Q96KW9 195 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 FSCN3Q9NQT6 498 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 SMPD4Q9NXE4 827 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 MBD1Q9UIS9 605 aaPredicted RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 FREM2Q5SZK8 3169 aa9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 MYO18AQ92614 2054 aaKnown RBP9.67□□□□□ -0.86
HNRNPC-227ENST00000556897 MYMKA6NI61 221 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 EIF5BO60841 1220 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 PPP1R37O75864 691 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 KAT7O95251 611 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 CFIP05156 583 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 ITPKAP23677 461 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 LMO2P25791 158 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 PCSK1P29120 753 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 LHX1P48742 406 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 PDE6CP51160 858 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 PSMC1P62191 440 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 DHCR24Q15392 516 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 SOWAHAQ2M3V2 549 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 MAP7D1Q3KQU3 841 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 EMC10Q5UCC4 262 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 LYSMD4Q5XG99 296 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 LMBRD2Q68DH5 695 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 FAM171BQ6P995 826 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 SLC23A3Q6PIS1 610 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 DYMQ7RTS9 669 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 PIP4P1Q86T03 277 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 C12orf40Q86WS4 652 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 BRSK2Q8IWQ3 736 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 ADGRG2Q8IZP9 1017 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 TOP6BLQ8N6T0 577 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 KRI1Q8N9T8 703 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 SPATA18Q8TC71 538 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 CACTINQ8WUQ7 758 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 LARP4BQ92615 738 aaKnown RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 MYLPFQ96A32 169 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 KIF2CQ99661 725 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 MTMR12Q9C0I1 747 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 RNF38Q9H0F5 515 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 POLMQ9NP87 494 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 GDAP2Q9NXN4 497 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 RBAKQ9NYW8 714 aaPredicted RBP9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 TRPM5Q9NZQ8 1165 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 SIX4Q9UIU6 781 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 PILRBQ9UKJ0 227 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 ITGA11Q9UKX5 1188 aa9.66□□□□□ -0.86
HNRNPC-227ENST00000556897 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms