RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 HSPBP1Q9NZL4 362 aa15.8■□□□□ 0.12
CHD8-211ENST00000556833 NME7Q9Y5B8 376 aa15.8■□□□□ 0.12
CHD8-211ENST00000556833 FRMD3A2A2Y4 597 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 ZNF233A6NK53 670 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 F8VP50 259 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 LEFTY2O00292 366 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CLIC2O15247 247 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 BCKDHBP21953 392 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 OPRD1P41143 372 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CYP2J2P51589 502 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CACNA2D1P54289 1103 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 KDSRQ06136 332 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 MESP2Q0VG99 397 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CUL4AQ13619 759 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 ALCAMQ13740 583 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 PLA2G2CQ5R387 149 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 PSAPL1Q6NUJ1 521 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 SYT13Q7L8C5 426 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 NELFCDQ8IXH7 590 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CAMKK1Q8N5S9 505 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 ACDQ96AP0 544 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CCDC127Q96BQ5 260 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 PCED1BQ96HM7 432 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 FUBP3Q96I24 572 aaKnown RBP eCLIP15.79■□□□□ 0.12
CHD8-211ENST00000556833 DPEP3Q9H4B8 488 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 RALYQ9UKM9 306 aaKnown RBP15.79■□□□□ 0.12
CHD8-211ENST00000556833 CDH9Q9ULB4 789 aa15.79■□□□□ 0.12
CHD8-211ENST00000556833 CCDC163A0A0D9SF12 145 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 PATE3B3GLJ2 98 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 CLDN5O00501 218 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 GIPC1O14908 333 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 CAVIN2O95810 425 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 CYP17A1P05093 508 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 PDCP20941 246 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 CASP1P29466 404 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 HOXD13P35453 343 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 MAGEA11P43364 429 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 SLC6A11P48066 632 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 ASIC1P78348 528 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 NR1H3Q13133 447 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 STK38Q15208 465 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 DUOXA2Q1HG44 320 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 FOXD4L6Q3SYB3 417 aaPredicted RBP15.78■□□□□ 0.12
CHD8-211ENST00000556833 FBXO43Q4G163 708 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 FOXD4L3Q6VB84 417 aaPredicted RBP15.78■□□□□ 0.12
CHD8-211ENST00000556833 DENND5BQ6ZUT9 1274 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 ARMCX6Q7L4S7 300 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 OR6B3Q8NGW1 331 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 DHX58Q96C10 678 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 ERLEC1Q96DZ1 483 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 ZC3H10Q96K80 434 aaKnown RBP15.78■□□□□ 0.12
CHD8-211ENST00000556833 RNF38Q9H0F5 515 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 SNX25Q9H3E2 840 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 VPS45Q9NRW7 570 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 TMEM30AQ9NV96 361 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 TRPM5Q9NZQ8 1165 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 ANGPTL2Q9UKU9 493 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 ARHGAP26Q9UNA1 814 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 CPQQ9Y646 472 aa15.78■□□□□ 0.12
CHD8-211ENST00000556833 CFAP47Q6ZTR5 3102 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.12
CHD8-211ENST00000556833 C4orf47A7E2U8 309 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 K7EQS6 105 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 FOXD2O60548 495 aaPredicted RBP15.77■□□□□ 0.12
CHD8-211ENST00000556833 RHOBTB1O94844 696 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 NFATC1O95644 943 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 CST3P01034 146 aaPredicted RBP15.77■□□□□ 0.12
CHD8-211ENST00000556833 HNRNPLP14866 589 aaKnown RBP eCLIP15.77■□□□□ 0.12
CHD8-211ENST00000556833 TNNI1P19237 187 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 WARSP23381 471 aaKnown RBP15.77■□□□□ 0.12
CHD8-211ENST00000556833 LIMK1P53667 647 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 SLC39A14Q15043 492 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 GAB4Q2WGN9 574 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 TRAPPC11Q7Z392 1133 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 C12orf40Q86WS4 652 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 USP33Q8TEY7 942 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 RLN3Q8WXF3 142 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 DDX1Q92499 740 aaKnown RBP15.77■□□□□ 0.12
CHD8-211ENST00000556833 EXOC4Q96A65 974 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 ZNF518BQ9C0D4 1074 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 CFAP97Q9P2B7 532 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
CHD8-211ENST00000556833 MTMR6Q9Y217 621 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 PCDHGA5Q9Y5G8 931 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 GON4LQ3T8J9 2241 aa15.77■□□□□ 0.12
CHD8-211ENST00000556833 ZFHX4Q86UP3 3567 aa15.77■□□□□ 0.11
CHD8-211ENST00000556833 ADAMTS9Q9P2N4 1935 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 SOBPA7XYQ1 873 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 TM4SF5O14894 197 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 AKAP3O75969 853 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 KCNK5O95279 499 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 MBL2P11226 248 aaPredicted RBP15.76■□□□□ 0.11
CHD8-211ENST00000556833 PMLP29590 882 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 TIE1P35590 1138 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 GNL1P36915 607 aaPredicted RBP15.76■□□□□ 0.11
CHD8-211ENST00000556833 DHPSP49366 369 aaPredicted RBP15.76■□□□□ 0.11
CHD8-211ENST00000556833 NOVA1P51513 510 aaKnown RBP15.76■□□□□ 0.11
CHD8-211ENST00000556833 TAF10Q12962 218 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms