RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CD48P09326 243 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 ACLYP53396 1101 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 HTRA3P83110 453 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 FNIP1Q8TF40 1166 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 LRRC45Q96CN5 670 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 CHST12Q9NRB3 414 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 PDCD11Q14690 1871 aaKnown RBP19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 RNF8O76064 485 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 LCP1P13796 627 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 GPD1P21695 349 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 HOXD10P28358 340 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 LRPAP1P30533 357 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 CDKN2BP42772 138 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 LPIN1Q14693 890 aa19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 HADHQ16836 314 aaKnown RBP19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 DDX56Q9NY93 547 aaKnown RBP19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 SAE1Q9UBE0 346 aaPredicted RBP19.24■□□□□ 0.67
SDR39U1-220ENST00000556548 hCG_1818297A0A087WSY0 165 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 CLDN5O00501 218 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 PAPSS1O43252 624 aaPredicted RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 TJP3O95049 919 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 POMCP01189 267 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 CST5P28325 142 aaPredicted RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 TKTP29401 623 aaKnown RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 DRG2P55039 364 aaKnown RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 TFDP3Q5H9I0 405 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 KCTD16Q68DU8 428 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 OLFML1Q6UWY5 402 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 HACE1Q8IYU2 909 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 CRYBG2Q8N1P7 616 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 ATL2Q8NHH9 583 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 SLC4A5Q9BY07 1137 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 TRPV6Q9H1D0 765 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 USP18Q9UMW8 372 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 C3orf70A6NLC5 250 aaPredicted RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 C2CD4BA6NLJ0 364 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 ZNF143P52747 638 aaPredicted RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 HNRNPH2P55795 449 aaKnown RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 CCNG2Q16589 344 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 PAN2Q504Q3 1202 aaKnown RBP19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 MAP3K21Q5TCX8 1036 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 ARHGAP17Q68EM7 881 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 GSTA5Q7RTV2 222 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 KCTD6Q8NC69 237 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 C3orf58Q8NDZ4 430 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 PEBP4Q96S96 227 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 TSPAN18Q96SJ8 248 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 SH3GL2Q99962 352 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 ADAM2Q99965 735 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 ASNSD1Q9NWL6 643 aa19.23■□□□□ 0.67
SDR39U1-220ENST00000556548 OPA1O60313 960 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 KRT7P08729 469 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 TTMPQ5BVD1 217 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 TMEM110Q86TL2 294 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 RPAINQ86UA6 219 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 ANKRD52Q8NB46 1076 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 INPP5FQ9Y2H2 1132 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 TRUB2O95900 331 aaKnown RBP19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 RABGGTBP53611 331 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 SLC6A3Q01959 620 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 BST2Q10589 180 aaKnown RBP19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 CCDC14Q49A88 953 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 CEP85LQ5SZL2 805 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 SCYL2Q6P3W7 929 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 POLNQ7Z5Q5 900 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 CCDC25Q86WR0 208 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 SENP8Q96LD8 212 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 CENPHQ9H3R5 247 aa19.22■□□□□ 0.67
SDR39U1-220ENST00000556548 I3L4J1 428 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 GAS8O95995 478 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 KDELR1P24390 212 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 ADCY8P40145 1251 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 UBAP2Q5T6F2 1119 aaKnown RBP19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 KIAA0319Q5VV43 1072 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 LIMS2Q7Z4I7 341 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 TOP6BLQ8N6T0 577 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 GRK7Q8WTQ7 553 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 NDRG1Q92597 394 aaKnown RBP19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 KHSRPQ92945 711 aaKnown RBP eCLIP19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 SLCO2A1Q92959 643 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 CNPY3Q9BT09 278 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 YY1AP1Q9H869 796 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 C10orf88Q9H8K7 445 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 NGRNQ9NPE2 291 aaKnown RBP19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 HOMER3Q9NSC5 361 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 SLC38A7Q9NVC3 462 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 ZNF148Q9UQR1 794 aa19.21■□□□□ 0.67
SDR39U1-220ENST00000556548 GOLGA6CA6NDK9 693 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 LIASO43766 372 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 MYCP01106 439 aaPredicted RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 INHAP05111 366 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 GOLGA6DP0CG33 693 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 WARSP23381 471 aaKnown RBP19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 BCAT1P54687 386 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 PLCB3Q01970 1234 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 CALCOCO2Q13137 446 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 PTK7Q13308 1070 aa19.2■□□□□ 0.66
SDR39U1-220ENST00000556548 SKIDA1Q1XH10 827 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms