RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 KLHL6Q8WZ60 621 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 LPPQ93052 612 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF668Q96K58 619 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 MTA3Q9BTC8 594 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 RPP25Q9BUL9 199 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 ANO3Q9BYT9 981 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 GBP3Q9H0R5 595 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 GLT8D2Q9H1C3 349 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 OSBPL2Q9H1P3 480 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 SLC6A17Q9H1V8 727 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 PARD6AQ9NPB6 346 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 ST7Q9NRC1 585 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 GABBR1Q9UBS5 961 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 DNAJB4Q9UDY4 337 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 RALYQ9UKM9 306 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 MTF2Q9Y483 593 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-239ENST00000556315 MYO10Q9HD67 2058 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 GPR179Q6PRD1 2367 aa5.41□□□□□ -1.54
ATXN3-239ENST00000556315 MYH7BA7E2Y1 1941 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ACACBO00763 2458 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 OTOGLQ3ZCN5 2332 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 hCG_1642624A0A1W2PR95 340 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ANKRD34BA5PLL1 514 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CCDC69A6NI79 296 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 FAM86B1E9PN63 330 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CSDE1O75534 798 aaKnown RBP5.4□□□□□ -1.54
ATXN3-239ENST00000556315 GJB6O95452 261 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CYP3A4P08684 503 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 INHBBP09529 407 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 FAM86B2P0C5J1 330 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 SPATA31D3P0C874 917 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 MYBP10242 640 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ITGA4P13612 1032 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 PMLP29590 882 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 SREBF1P36956 1147 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 GLUD2P49448 558 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 DNM2P50570 870 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 SHC2P98077 582 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 DSG1Q02413 1049 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 SERINC3Q13530 473 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 PPP2R5DQ14738 602 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ACAP1Q15027 740 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CSRP2Q16527 193 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CLEC16AQ2KHT3 1053 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 AXDND1Q5T1B0 1012 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-239ENST00000556315 LAIR1Q6GTX8 287 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 TSSK4Q6SA08 328 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CASC1Q6TDU7 716 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 PARM1Q6UWI2 310 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF852Q6ZMS4 543 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 SPATA31D4Q6ZUB0 917 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-239ENST00000556315 TAS1R1Q7RTX1 841 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 HEATR3Q7Z4Q2 680 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
ATXN3-239ENST00000556315 PALB2Q86YC2 1186 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 FANCBQ8NB91 859 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 FGF14Q92915 247 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF577Q9BSK1 485 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 MYL10Q9BUA6 226 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 LNPKQ9C0E8 428 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 EPN3Q9H201 632 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 UBN1Q9NPG3 1134 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CHST7Q9NS84 486 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 SEMA4GQ9NTN9 838 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 TCEAL9Q9UHQ7 104 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 CDH7Q9ULB5 785 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF281Q9Y2X9 895 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 PCDHB2Q9Y5E7 798 aa5.4□□□□□ -1.54
ATXN3-239ENST00000556315 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.4□□□□□ -1.54
ATXN3-239ENST00000556315 ATG2AQ2TAZ0 1938 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 A0A087WZ62 844 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 MYOCOSA0A1B0GUC4 107 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 SMCO2A6NFE2 343 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 B2RBV5 119 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 B8ZZF3 427 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 TGM5O43548 720 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 NUAK1O60285 661 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 B4GALT3O60512 393 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 EFEMP2O95967 443 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 PROS1P07225 676 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 HNRNPA1P09651 372 aaKnown RBP eCLIP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CD247P20963 164 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CD72P21854 359 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 LIFRP42702 1097 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 OR1G1P47890 313 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 ADCY7P51828 1080 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 NAPAP54920 295 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 ANTXR2P58335 489 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 SETQ01105 290 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-239ENST00000556315 CREMQ03060 361 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 ADCY1Q08828 1119 aa5.39□□□□□ -1.55
ATXN3-239ENST00000556315 MTAPQ13126 283 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms