RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 INO80B-WBP1J3KQ70 363 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 SLC16A3O15427 465 aaKnown RBP4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 PRC1O43663 620 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 SRGAP2O75044 1071 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 URI1O94763 535 aaPredicted RBP4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 RASAL1O95294 804 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 TRIM27P14373 513 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 JUPP14923 745 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 KLRC1P26715 233 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 PCSK6P29122 969 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 PTDSS1P48651 473 aaKnown RBP4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 PDE6CP51160 858 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 TBX4P57082 545 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 BMPR2Q13873 1038 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 ERCC6LQ2NKX8 1250 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 AKNAD1Q5T1N1 836 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 KLHDC7AQ5VTJ3 777 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 ZKSCAN2Q63HK3 967 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 XAGE5Q8WWM1 108 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 ATRIPQ8WXE1 791 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 SLC9A6Q92581 669 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 PPP1R9BQ96SB3 815 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 ALG8Q9BVK2 526 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 NAA15Q9BXJ9 866 aaKnown RBP4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 INO80BQ9C086 356 aaPredicted RBP4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 GLOD4Q9HC38 313 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 CPNE5Q9HCH3 593 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 SNX14Q9Y5W7 946 aa4.39□□□□□ -1.71
SUPT16H-206ENST00000556309 ARHGEF17Q96PE2 2063 aaPredicted RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 LOC102723971A0A1B0GUV8 181 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 ZAR1LA6NP61 321 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 RGS10O43665 173 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 TLR5O60602 858 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 TTLL1O95922 423 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 MT-ND5P03915 603 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 IL6RP08887 468 aaPredicted RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 ENGP17813 658 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 CARSP49589 748 aaKnown RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 PRIM2P49643 509 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 PDE1AP54750 535 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 ZNF543Q08ER8 600 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 SLC29A2Q14542 456 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 KCNAB1Q14722 419 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 RRAGBQ5VZM2 374 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 SLC9A4Q6AI14 798 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 DPY19L3Q6ZPD9 716 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 AMIGO2Q86SJ2 522 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 SPARTQ8N0X7 666 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 ABRAQ8N0Z2 381 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 KRT78Q8N1N4 520 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 PJA1Q8NG27 643 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 OSCP1Q8WVF1 389 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 ZBTB45Q96K62 511 aaPredicted RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 SNX22Q96L94 193 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 HAPLN3Q96S86 360 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 BTBD1Q9H0C5 482 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 R3HDMLQ9H3Y0 253 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 ARHGEF3Q9NR81 526 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 GJB4Q9NTQ9 266 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 GEMIN8Q9NWZ8 242 aaKnown RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 DNMT3BQ9UBC3 853 aaKnown RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 CCNL1Q9UK58 526 aaPredicted RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 CDY1Q9Y6F8 540 aa4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 FNDC1Q4ZHG4 1894 aaPredicted RBP4.38□□□□□ -1.71
SUPT16H-206ENST00000556309 CCDC151A5D8V7 595 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 POM121BA6NF01 834 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 RRP9O43818 475 aaKnown RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ORC4O43929 436 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 CAND2O75155 1236 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 KRT18P05783 430 aaKnown RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 HMGB1P09429 215 aaKnown RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 TXNP10599 105 aaKnown RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 HGFP14210 728 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 NDUFB7P17568 137 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ACVR2AP27037 513 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 CYP2C18P33260 490 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ALDH9A1P49189 494 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 CCT8P50990 548 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 NEK3P51956 506 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 CACNA2D1P54289 1103 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 C21orf58P58505 322 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 HTRA4P83105 476 aaPredicted RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 STK3Q13188 491 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ARHGEF7Q14155 803 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 NPY5RQ15761 445 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 INSCQ1MX18 579 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ZNF618Q5T7W0 954 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 STRIP1Q5VSL9 837 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 IL31Q6EBC2 164 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 FBXO42Q6P3S6 717 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ZNF551Q7Z340 670 aaPredicted RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 LRRC71Q8N4P6 559 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 CCDC33Q8N5R6 958 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 BOLLQ8N9W6 283 aaKnown RBP4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 MSLNLQ96KJ4 702 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 C17orf80Q9BSJ5 609 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ARNT2Q9HBZ2 717 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 PNPLA8Q9NP80 782 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 XPNPEP3Q9NQH7 507 aa4.37□□□□□ -1.71
SUPT16H-206ENST00000556309 ZNF212Q9UDV6 495 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms