RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PCYOX1Q9UHG3 505 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 MTUS1Q9ULD2 1270 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 BARX2Q9UMQ3 279 aaPredicted RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 POLIQ9UNA4 740 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 AGAP1Q9UPQ3 857 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 SIGLEC16A6NMB1 481 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 TMEM110-MUSTN1A8MSY1 372 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 PODXLO00592 558 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 TLR3O15455 904 aaKnown RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 SEPT4O43236 478 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 XPOTO43592 962 aaKnown RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 PHF2O75151 1096 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 MYBL2P10244 700 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 CD58P19256 250 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 BRD2P25440 801 aaKnown RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 GBP1P32455 592 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 GABRB2P47870 512 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 CBX1P83916 185 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 BEX3Q00994 111 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 PTPN11Q06124 597 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 GABPB1Q06547 395 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 NOGQ13253 232 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 PIGHQ14442 188 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 ZNF268Q14587 947 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 TEAD4Q15561 434 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 UBXN11Q5T124 520 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 SEL1L2Q5TEA6 688 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 LIMS2Q7Z4I7 341 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 UNC93AQ86WB7 457 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 ERICH1Q86X53 443 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 RHOT1Q8IXI2 618 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 KLHL7Q8IXQ5 586 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 KATNAL2Q8IYT4 538 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 PRELID2Q8N945 189 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 C3orf20Q8ND61 904 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 BEST2Q8NFU1 509 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 EXD1Q8NHP7 514 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 FNIP1Q8TF40 1166 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 CASKIN2Q8WXE0 1202 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 SLCO2A1Q92959 643 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 LENG1Q96BZ8 264 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 PPP1R16BQ96T49 567 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 OSMRQ99650 979 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 C11orf70Q9BRQ4 267 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 CELF4Q9BZC1 486 aaKnown RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 ELOVL4Q9GZR5 314 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 MIS12Q9H081 205 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 RAB17Q9H0T7 212 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 LRRC19Q9H756 370 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 CHST12Q9NRB3 414 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 FAM114A2Q9NRY5 505 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 HOMER3Q9NSC5 361 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 SNTG2Q9NY99 539 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 CHORDC1Q9UHD1 332 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 ABT1Q9ULW3 272 aaKnown RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 HPCAL4Q9UM19 191 aa8.77□□□□□ -1.01
ATXN3-235ENST00000556082 UBQLN1Q9UMX0 589 aaKnown RBP8.77□□□□□ -1.01
ATXN3-235ENST00000556082 O00370 1275 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 PIRO00625 290 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 PROCP04070 461 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ITGB2P05107 769 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 RARBP10826 455 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ATF7P17544 494 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 CST5P28325 142 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 PNPLA4P41247 253 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 MARCKSL1P49006 195 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 FNTAP49354 379 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 CARSP49589 748 aaKnown RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 FLT3LGP49771 235 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 CDH8P55286 799 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ZNF200P98182 395 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 TMEM62Q0P6H9 643 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ZNF211Q13398 564 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ACAP1Q15027 740 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 SIX1Q15475 284 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 PTPROQ16827 1216 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 SPDYCQ5MJ68 293 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 DENND1BQ6P3S1 775 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 DNAJC24Q6P3W2 148 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 LCLAT1Q6UWP7 414 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 RSPH3Q86UC2 560 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 SERINC5Q86VE9 423 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 PASD1Q8IV76 773 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 RCOR2Q8IZ40 523 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 C1orf131Q8NDD1 294 aaKnown RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 KLHDC9Q8NEP7 349 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 TMEM40Q8WWA1 233 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 TRIB2Q92519 343 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 C18orf8Q96DM3 657 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ZMAT2Q96NC0 199 aaKnown RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 ERP44Q9BS26 406 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 NT5C1AQ9BXI3 368 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 EIF2AQ9BY44 585 aaKnown RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 FAM129AQ9BZQ8 928 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 DNAI2Q9GZS0 605 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 DDX47Q9H0S4 455 aaKnown RBP8.76□□□□□ -1.01
ATXN3-235ENST00000556082 SMYD3Q9H7B4 428 aa8.76□□□□□ -1.01
ATXN3-235ENST00000556082 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms