RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 BDNFP23560 247 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PCSK1P29120 753 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 AMPD2Q01433 879 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ALCAMQ13740 583 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SLC39A14Q15043 492 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 IL31Q6EBC2 164 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 VSTM1Q6UX27 236 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 EPM2AIP1Q7L775 607 aaPredicted RBP15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 RASSF3Q86WH2 238 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 C12orf50Q8NA57 414 aaPredicted RBP15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PCED1BQ96HM7 432 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 HPDLQ96IR7 371 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 VPS45Q9NRW7 570 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CDH9Q9ULB4 789 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 WASF3Q9UPY6 502 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 INVSQ9Y283 1065 aa15.36■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CEP192Q8TEP8 1941 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 LEFTY2O00292 366 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 GIPC1O14908 333 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CYP17A1P05093 508 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TMEM191BP0C7N4 346 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 IFNAR2P48551 515 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TMEM92Q6UXU6 159 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CCDC73Q6ZRK6 1079 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ADGRG2Q8IZP9 1017 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SYCP3Q8IZU3 236 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TTC16Q8NEE8 873 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MRPL45Q9BRJ2 306 aaKnown RBP15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 KBTBD4Q9NVX7 518 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MTMR6Q9Y217 621 aa15.35■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PCNX2A6NKB5 2137 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 LNP1A1A4G5 178 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ZNF840PA6NDX5 716 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 OAS1P00973 400 aaKnown RBP15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 STAT6P42226 847 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SLC6A11P48066 632 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 NOP14P78316 857 aaKnown RBP15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 SLC7A9P82251 487 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 EHHADHQ08426 723 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 KCNB1Q14721 858 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PMS2CLQ68D20 193 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TRAPPC11Q7Z392 1133 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 C12orf40Q86WS4 652 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PHTF2Q8N3S3 785 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 PDILTQ8N807 584 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MDGA1Q8NFP4 955 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 OLIG1Q8TAK6 271 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MYCBPAPQ8TBZ2 947 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ZNF516Q92618 1163 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ACDQ96AP0 544 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ANKRD36BP1Q96IX9 119 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CEP295NLQ96MC4 621 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 TPSD1Q9BZJ3 242 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 HSPBP1Q9NZL4 362 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 MAGEC2Q9UBF1 373 aaPredicted RBP15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ANGPTL2Q9UKU9 493 aa15.34■□□□□ 0.05
CHMP4BP1-201ENST00000556017 CACNA1EQ15878 2313 aa15.33■□□□□ 0.05
CHMP4BP1-201ENST00000556017 ZNF233A6NK53 670 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PATE3B3GLJ2 98 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 F8VP50 259 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CDX4O14627 284 aaPredicted RBP15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SCAMP3O14828 347 aaKnown RBP15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CAVIN2O95810 425 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PFKLP17858 780 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KCNA4P22459 653 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DGKEP52429 567 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CREB5Q02930 508 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DUOXA2Q1HG44 320 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C2orf27AQ580R0 203 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 RNF43Q68DV7 783 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 RHBDF2Q6PJF5 856 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C4orf50Q6ZRC1 276 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DENND5BQ6ZUT9 1274 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FILIP1Q7Z7B0 1213 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 WDR49Q8IV35 697 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 FSIP1Q8NA03 581 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 NOC3LQ8WTT2 800 aaKnown RBP15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZFRQ96KR1 1074 aaKnown RBP15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C8orf48Q96LL4 319 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TRIM9Q9C026 710 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 XYLT2Q9H1B5 865 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DPEP3Q9H4B8 488 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MMP17Q9ULZ9 603 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ADAMTS9Q9P2N4 1935 aa15.33■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZFYVE26Q68DK2 2539 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 A0A0A0MRY4 1105 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C4orf47A7E2U8 309 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KIAA0391O15091 583 aaKnown RBP15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TACC1O75410 805 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 NFATC1O95644 943 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 GRIK1P39086 918 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SEC13P55735 322 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MYO1EQ12965 1108 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PSMD2Q13200 908 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CRY1Q16526 586 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CNNM4Q6P4Q7 775 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms