RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 TRPC3Q13507 836 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 EML3Q32P44 896 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 PRR23CQ6ZRP0 262 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 SYT13Q7L8C5 426 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 CACNA2D4Q7Z3S7 1137 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 ARL14EPQ8N8R7 260 aaPredicted RBP12.28□□□□□ -0.44
LRP1-209ENST00000555941 STKLD1Q8NE28 680 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 RIN3Q8TB24 985 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 CD101Q93033 1021 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 ACDQ96AP0 544 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 PCED1BQ96HM7 432 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 SLC22A12Q96S37 553 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 ELOVL4Q9GZR5 314 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 CFAP45Q9UL16 551 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 PTPRDP23468 1912 aa12.28□□□□□ -0.44
LRP1-209ENST00000555941 HELZP42694 1942 aaKnown RBP12.27□□□□□ -0.44
LRP1-209ENST00000555941 C2orf78A6NCI8 922 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 SLC9A3R1O14745 358 aaPredicted RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 HCRTO43612 131 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 RNF40O75150 1001 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 EGFP01133 1207 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 ZSCAN22P10073 491 aaPredicted RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 PTPN1P18031 435 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 RAP1GAPP47736 663 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 CYP2J2P51589 502 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 SLC7A9P82251 487 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 SRSF5Q13243 272 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 CCDC142Q17RM4 750 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 KNOP1Q1ED39 458 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 RDH13Q8NBN7 331 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 OR6B3Q8NGW1 331 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 TMEM174Q8WUU8 243 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 DDX1Q92499 740 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 CCDC127Q96BQ5 260 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 ZC3H10Q96K80 434 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 FBRSL1Q9HCM7 1045 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 PCDHGA5Q9Y5G8 931 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 WNT6Q9Y6F9 365 aa12.27□□□□□ -0.45
LRP1-209ENST00000555941 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.27□□□□□ -0.45
LRP1-209ENST00000555941 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.26□□□□□ -0.45
LRP1-209ENST00000555941 ZNF840PA6NDX5 716 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 CLIC2O15247 247 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 EXOC3O60645 756 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 CCDC192P0DO97 292 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 ME1P48163 572 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 CLDN10P78369 228 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 PSMD2Q13200 908 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 TDRD10Q5VZ19 366 aaKnown RBP12.26□□□□□ -0.45
LRP1-209ENST00000555941 RESP18Q5W5W9 173 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 DDX42Q86XP3 938 aaKnown RBP eCLIP12.26□□□□□ -0.45
LRP1-209ENST00000555941 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 CEP57L1Q8IYX8 460 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 PDZD8Q8NEN9 1154 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 SLITRK1Q96PX8 696 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 MRPL45Q9BRJ2 306 aaKnown RBP12.26□□□□□ -0.45
LRP1-209ENST00000555941 EBF1Q9UH73 591 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 PCDHA7Q9UN72 937 aa12.26□□□□□ -0.45
LRP1-209ENST00000555941 ATG2BQ96BY7 2078 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 DCDC2BA2VCK2 349 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 A8MXQ7 604 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 F8VP50 259 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 AXIN1O15169 862 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 PHACTR2O75167 634 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 RTN3O95197 1032 aaPredicted RBP12.25□□□□□ -0.45
LRP1-209ENST00000555941 EPN2O95208 641 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 APBB3O95704 486 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 OLFM2O95897 454 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 F13A1P00488 732 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 HSP90AA1P07900 732 aaKnown RBP12.25□□□□□ -0.45
LRP1-209ENST00000555941 SLFN14P0C7P3 912 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 LIMK1P53667 647 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 MYL6P60660 151 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 USP46P62068 366 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 C11orf74Q86VG3 221 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 SLC9A9Q8IVB4 645 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 HSCBQ8IWL3 235 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 B3GALNT2Q8NCR0 500 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 RPLP0P6Q8NHW5 317 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 OVCA2Q8WZ82 227 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 ZNF516Q92618 1163 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 LINC00597Q9H2U6 94 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 SLC39A2Q9NP94 309 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 ATP8B3O60423 1300 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
LRP1-209ENST00000555941 LEFTY2O00292 366 aa12.24□□□□□ -0.45
LRP1-209ENST00000555941 OAS1P00973 400 aaKnown RBP12.24□□□□□ -0.45
LRP1-209ENST00000555941 MYL1P05976 194 aa12.24□□□□□ -0.45
LRP1-209ENST00000555941 P4HA1P13674 534 aa12.24□□□□□ -0.45
LRP1-209ENST00000555941 EIF2DP41214 584 aaKnown RBP12.24□□□□□ -0.45
LRP1-209ENST00000555941 PXNP49023 591 aaPredicted RBP12.24□□□□□ -0.45
LRP1-209ENST00000555941 TAF10Q12962 218 aa12.24□□□□□ -0.45
LRP1-209ENST00000555941 DMC1Q14565 340 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms