RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 FNIP1Q8TF40 1166 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 SEPT1Q8WYJ6 367 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ALKBH8Q96BT7 664 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 ERP27Q96DN0 273 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 ACO2Q99798 780 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 MYLK2Q9H1R3 596 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 LHX5Q9H2C1 402 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 LRMDAQ9H2I8 198 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 EBF2Q9HAK2 575 aa7.34□□□□□ -1.23
TDP1-213ENST00000555880 CPSF3Q9UKF6 684 aaKnown RBP7.34□□□□□ -1.23
TDP1-213ENST00000555880 NOP56O00567 594 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 TM9SF1O15321 606 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 FAM189A1O60320 539 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 HNRNPCL1O60812 293 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 LRCH4O75427 683 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 WFS1O76024 890 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 ANP32DO95626 131 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 KRT19P08727 400 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 TSHRP16473 764 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 KDELR1P24390 212 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 RFC1P35251 1148 aaPredicted RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 ASPAP45381 313 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 CLNS1AP54105 237 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 SLC25A11Q02978 314 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 RNASELQ05823 741 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 MGAT5Q09328 741 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 ACAP1Q15027 740 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 CCDC142Q17RM4 750 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 PARP6Q2NL67 630 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 SMTNL2Q2TAL5 461 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 ZC3H12AQ5D1E8 599 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 ZNF667Q5HYK9 610 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 TXNRD3NBQ6F5E7 133 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 DENND1BQ6P3S1 775 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 LVRNQ6Q4G3 990 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 METTL7BQ6UX53 244 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 C3orf62Q6ZUJ4 267 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 RFX6Q8HWS3 928 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 NLGN2Q8NFZ4 835 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 AGAP11Q8TF27 550 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 TFAP2BQ92481 460 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 INPP5DQ92835 1189 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 STAMBPL1Q96FJ0 436 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 PAFAH2Q99487 392 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 MAK16Q9BXY0 300 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 ACSS3Q9H6R3 686 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 KIF9Q9HAQ2 790 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 NXF1Q9UBU9 619 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 XPO7Q9UIA9 1087 aaKnown RBP7.33□□□□□ -1.24
TDP1-213ENST00000555880 C15orf41Q9Y2V0 281 aa7.33□□□□□ -1.24
TDP1-213ENST00000555880 IQANK1A0A1B0GTG1 560 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 C3orf70A6NLC5 250 aaPredicted RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 APOC4-APOC2K7ER74 178 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TYROBPO43914 113 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SPAG6O75602 509 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 APOC2P02655 101 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 P4HA1P13674 534 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 APLP1P51693 650 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 EIF3EP60228 445 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 BASP1P80723 227 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 ROR1Q01973 937 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 MOGSQ13724 837 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 BBS9Q3SYG4 887 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 PTPN20Q4JDL3 420 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TJAP1Q5JTD0 557 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 KCNT1Q5JUK3 1230 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SPDYAQ5MJ70 313 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ATF7IP2Q5U623 682 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ANGEL2Q5VTE6 544 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 TSHZ1Q6ZSZ6 1077 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 GPC2Q8N158 579 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 WDTC1Q8N5D0 677 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 NAT8LQ8N9F0 302 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 FBXO36Q8NEA4 188 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ZNF398Q8TD17 642 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 NSMCE1Q8WV22 266 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 CPT1BQ92523 772 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ZNF75CPQ92670 426 aaPredicted RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 THOC1Q96FV9 657 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 FAXDC2Q96IV6 333 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 CYTH2Q99418 400 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 PCYT2Q99447 389 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 CALN1Q9BXU9 219 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 MIS12Q9H081 205 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 RPF1Q9H9Y2 349 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 RSAD1Q9HA92 442 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 METTL5Q9NRN9 209 aaKnown RBP7.32□□□□□ -1.24
TDP1-213ENST00000555880 ASNSD1Q9NWL6 643 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 SNCAIPQ9Y6H5 919 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 WDR90Q96KV7 1748 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ANK1P16157 1881 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 A0A1W2PPM1 405 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 INO80B-WBP1J3KQ70 363 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 ACKR2O00590 384 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 B4GALT4O60513 344 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 BANF1O75531 89 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 MT-ND3P03897 115 aa7.32□□□□□ -1.24
TDP1-213ENST00000555880 RPSAP08865 295 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms