RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 BRD9Q9H8M2 597 aa24.24■■□□□ 1.47
CDKN3-208ENST00000555837 FAM49BQ9NUQ9 324 aa24.24■■□□□ 1.47
CDKN3-208ENST00000555837 GCNT4Q9P109 453 aa24.24■■□□□ 1.47
CDKN3-208ENST00000555837 HESX1Q9UBX0 185 aa24.24■■□□□ 1.47
CDKN3-208ENST00000555837 MUC3AQ02505 3323 aa24.24■■□□□ 1.47
CDKN3-208ENST00000555837 CLDN5O00501 218 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 PAEPP09466 180 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 USP17L7P0C7H9 530 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 ZNF268Q14587 947 aaPredicted RBP24.23■■□□□ 1.47
CDKN3-208ENST00000555837 ZNF394Q53GI3 561 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 SGO2Q562F6 1265 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 TANGO2Q6ICL3 276 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 ELMO3Q96BJ8 720 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 PRRX2Q99811 253 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 TRPV5Q9NQA5 729 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 NCANO14594 1321 aa24.23■■□□□ 1.47
CDKN3-208ENST00000555837 ZNF263O14978 683 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 CCDC130P13994 396 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 NPR3P17342 541 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 ADORA2BP29275 332 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 NUBP1P53384 320 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 MFAP3P55082 362 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 PRKCQQ04759 706 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 LRMPQ12912 555 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 EXOC3L4Q17RC7 722 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 CCDC142Q17RM4 750 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 ARHGAP29Q52LW3 1261 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 ARHGAP17Q68EM7 881 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 FBXL6Q8N531 539 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 MAB21L3Q8N8X9 362 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 C12orf29Q8N999 325 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 ASIC4Q96FT7 647 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 MSANTD3Q96H12 275 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 ZSWIM3Q96MP5 696 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 TUBGCP2Q9BSJ2 902 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 DUSP16Q9BY84 665 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 UBXN6Q9BZV1 441 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 HMGXB4Q9UGU5 601 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 HCN4Q9Y3Q4 1203 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 NFE2L3Q9Y4A8 694 aa24.22■■□□□ 1.47
CDKN3-208ENST00000555837 HEPACAM2A8MVW5 462 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 CKMP06732 381 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 CFHP08603 1231 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 VDRP11473 427 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 RAD23BP54727 409 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 CYP4F8P98187 520 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 SKOR2Q2VWA4 1001 aaPredicted RBP24.21■■□□□ 1.47
CDKN3-208ENST00000555837 CC2D1AQ6P1N0 951 aaPredicted RBP24.21■■□□□ 1.47
CDKN3-208ENST00000555837 WHAMMQ8TF30 809 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 FBXO32Q969P5 355 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 INTS2Q9H0H0 1204 aaKnown RBP24.21■■□□□ 1.47
CDKN3-208ENST00000555837 TDP1Q9NUW8 608 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 PCDHB4Q9Y5E5 795 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 PTPRDP23468 1912 aa24.21■■□□□ 1.47
CDKN3-208ENST00000555837 KCNJ18B7U540 433 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 PES1O00541 588 aaKnown RBP24.2■■□□□ 1.46
CDKN3-208ENST00000555837 CHADO15335 359 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 GLULP15104 373 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 FCARP24071 287 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 MLLT6P55198 1093 aaPredicted RBP24.2■■□□□ 1.46
CDKN3-208ENST00000555837 MAP3K7CLP57077 242 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 GPC5P78333 572 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 KCNJ12Q14500 433 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 KLHL40Q2TBA0 621 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 VWA3BQ502W6 1294 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 PAQR9Q6ZVX9 377 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 KIAA1958Q8N8K9 716 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 SLC4A11Q8NBS3 891 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 LMO3Q8TAP4 145 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 BPIFB1Q8TDL5 484 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 CSGALNACT1Q8TDX6 532 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 TWNKQ96RR1 684 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 NELL2Q99435 816 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 SLC46A2Q9BY10 475 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 KCNH6Q9H252 994 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 NDST4Q9H3R1 872 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 TRPC7Q9HCX4 862 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 ARHGEF3Q9NR81 526 aa24.2■■□□□ 1.46
CDKN3-208ENST00000555837 MRPS17Q9Y2R5 130 aaKnown RBP24.2■■□□□ 1.46
CDKN3-208ENST00000555837 FAM86C2PA6NEL3 165 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 STK25O00506 426 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 LRRN2O75325 713 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 CD19P15391 556 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 HDCP19113 662 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 PSEN1P49768 467 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 CLCN5P51795 746 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 SLC5A3P53794 718 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 MYL5Q02045 173 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 FCHO2Q0JRZ9 810 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 TAF10Q12962 218 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 ORC1Q13415 861 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 TCP11X2Q5H9J9 407 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 TMEM270Q6UE05 265 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 TMEM150AQ86TG1 271 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 TADA2BQ86TJ2 420 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 DDX42Q86XP3 938 aaKnown RBP eCLIP24.19■■□□□ 1.46
CDKN3-208ENST00000555837 IRF2BP1Q8IU81 584 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 SIX5Q8N196 739 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 ANKRD52Q8NB46 1076 aa24.19■■□□□ 1.46
CDKN3-208ENST00000555837 EXOC4Q96A65 974 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms