RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 PHACTR2O75167 634 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 AKAP3O75969 853 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 RTN3O95197 1032 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 NFATC1O95644 943 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 CST3P01034 146 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 PDGFRBP09619 1106 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 P4HA1P13674 534 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 PTPN1P18031 435 aaKnown RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 HDCP19113 662 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 TRIM21P19474 475 aaKnown RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 CMA1P23946 247 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 AFMP43652 599 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 FNTBP49356 437 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 KRT85P78386 507 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 DNM1Q05193 864 aaKnown RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 SIM2Q14190 667 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 ZNF699Q32M78 642 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 EML3Q32P44 896 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 FOXD4L6Q3SYB3 417 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 SCARA3Q6AZY7 606 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 TRIM68Q6AZZ1 485 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 FSTL4Q6MZW2 842 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 FOXD4L3Q6VB84 417 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 DDX42Q86XP3 938 aaKnown RBP eCLIP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 CAMKK1Q8N5S9 505 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 B3GALNT2Q8NCR0 500 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 STKLD1Q8NE28 680 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 RIN3Q8TB24 985 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 SH3RF2Q8TEC5 729 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 PARD3BQ8TEW8 1205 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 FOXD4L4Q8WXT5 416 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 OVCA2Q8WZ82 227 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 TAF4BQ92750 862 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 CCDC47Q96A33 483 aaKnown RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 ACDQ96AP0 544 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 CHFRQ96EP1 664 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 TNIP3Q96KP6 325 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 SLITRK1Q96PX8 696 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 P2RY13Q9BPV8 354 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 MRPL45Q9BRJ2 306 aaKnown RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 XYLT2Q9H1B5 865 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 ECT2Q9H8V3 914 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 ATP6V1DQ9Y5K8 247 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 MYH10P35580 1976 aa9.6□□□□□ -0.87
AC004828.1-201ENST00000555303 C2orf78A6NCI8 922 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 OTOL1A6NHN0 477 aaPredicted RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 LRRIQ3A6PVS8 624 aaPredicted RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 A8MXQ7 604 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 F8VP50 259 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 SLC9A3R1O14745 358 aaPredicted RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 MAPK13O15264 365 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 KLRC4O43908 158 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 OLFM2O95897 454 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 ARSAP15289 507 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 PFKFB1P16118 471 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 TGM1P22735 817 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 CASP1P29466 404 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 GJA4P35212 333 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 MYL6P60660 151 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 SLC7A9P82251 487 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 ENPEPQ07075 957 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 BIRC3Q13489 604 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 RSPO4Q2I0M5 234 aaPredicted RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 ZNF667Q5HYK9 610 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 TDRD10Q5VZ19 366 aaKnown RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 PRR23BQ6ZRT6 265 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 ARL14EPQ8N8R7 260 aaPredicted RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 KIAA0895Q8NCT3 520 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 CD101Q93033 1021 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 PAGE5Q96GU1 130 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 LOXL4Q96JB6 756 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 SPATA32Q96LK8 384 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 SLC22A12Q96S37 553 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 CYP2S1Q96SQ9 504 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 KCTD10Q9H3F6 313 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 COMMD8Q9NX08 183 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 SERTAD1Q9UHV2 236 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 CDV3Q9UKY7 258 aaKnown RBP9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 USP18Q9UMW8 372 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 SLC8A2Q9UPR5 921 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 HPSEQ9Y251 543 aa9.59□□□□□ -0.87
AC004828.1-201ENST00000555303 FAM237AA0A1B0GTK4 181 aa9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 ZNF840PA6NDX5 716 aa9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 IKBKBO14920 756 aa9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 HRO43593 1189 aa9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 CALUO43852 315 aaPredicted RBP9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 RNF40O75150 1001 aa9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 OAS1P00973 400 aaKnown RBP9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 NR3C1P04150 777 aa9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 RPN1P04843 607 aaKnown RBP9.58□□□□□ -0.88
AC004828.1-201ENST00000555303 EIF2DP41214 584 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms