RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 A0A0A0MRY4 1105 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 TK2O00142 265 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 APODP05090 189 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 PLA2G2AP14555 144 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 CYP2F1P24903 491 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 EIF2DP41214 584 aaKnown RBP10.37□□□□□ -0.75
SCFD1-215ENST00000555259 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
SCFD1-215ENST00000555259 TSPY1Q01534 308 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 CYP4F3Q08477 520 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 RAD51AP2Q09MP3 1159 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 TMEM132DQ14C87 1099 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 PLEKHG6Q3KR16 790 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 C12orf40Q86WS4 652 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 SLC41A1Q8IVJ1 513 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 CD302Q8IX05 232 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 SCUBE3Q8IX30 993 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 ADGRG2Q8IZP9 1017 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 NECAB1Q8N987 351 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 TRIML1Q8N9V2 468 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 FSIP1Q8NA03 581 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 LEO1Q8WVC0 666 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-215ENST00000555259 HSPA12BQ96MM6 686 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 ABCB6Q9NP58 842 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 CALCOCO1Q9P1Z2 691 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 PCOLCE2Q9UKZ9 415 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 DERAQ9Y315 318 aa10.37□□□□□ -0.75
SCFD1-215ENST00000555259 MYO18AQ92614 2054 aaKnown RBP10.37□□□□□ -0.75
SCFD1-215ENST00000555259 ANAPC1Q9H1A4 1944 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 GOLGA4Q13439 2230 aaKnown RBP10.36□□□□□ -0.75
SCFD1-215ENST00000555259 IGHV1OR15-9A0A0B4J2B8 117 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 LEFTY2O00292 366 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 HNRNPDLO14979 420 aaKnown RBP10.36□□□□□ -0.75
SCFD1-215ENST00000555259 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
SCFD1-215ENST00000555259 GABRG2P18507 467 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 CDC25AP30304 524 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 LIG4P49917 911 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 PDIA5Q14554 519 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 DHCR24Q15392 516 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 KCNK18Q7Z418 384 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 FILIP1Q7Z7B0 1213 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 IGSF22Q8N9C0 903 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 NSUN7Q8NE18 718 aaKnown RBP10.36□□□□□ -0.75
SCFD1-215ENST00000555259 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 ARHGEF4Q9NR80 690 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 CPSF3Q9UKF6 684 aaKnown RBP10.36□□□□□ -0.75
SCFD1-215ENST00000555259 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 HELZP42694 1942 aaKnown RBP10.36□□□□□ -0.75
SCFD1-215ENST00000555259 SHROOM3Q8TF72 1996 aa10.36□□□□□ -0.75
SCFD1-215ENST00000555259 TRABD2BA6NFA1 517 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 KPNA7A9QM74 516 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 JAK2O60674 1132 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 GRIA2P42262 883 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 TNFRSF4P43489 277 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 PDE6CP51160 858 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ATP2C1P98194 919 aaPredicted RBP10.35□□□□□ -0.75
SCFD1-215ENST00000555259 KDSRQ06136 332 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 GRIK2Q13002 908 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 RESTQ13127 1097 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 TTC38Q5R3I4 469 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 MARCH9Q86YJ5 346 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 RGL4Q8IZJ4 473 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 C4orf32Q8N8J7 132 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 MSTO1Q9BUK6 570 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 FAM124BQ9H5Z6 455 aaPredicted RBP10.35□□□□□ -0.75
SCFD1-215ENST00000555259 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 C2CD2Q9Y426 696 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ATMQ13315 3056 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 TCHHQ07283 1943 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 A0A0B4J269 797 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 H0YCG3 227 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 SCAMP3O14828 347 aaKnown RBP10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ATXN7O15265 892 aaPredicted RBP10.35□□□□□ -0.75
SCFD1-215ENST00000555259 PIGRP01833 764 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ABCG1P45844 678 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 NCKAP1LP55160 1127 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 GUCY1B3Q02153 619 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 CAMK2BQ13554 666 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 CCDC142Q17RM4 750 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 SV2CQ496J9 727 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 CFAP221Q4G0U5 840 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 KRT79Q5XKE5 535 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 RHBDF2Q6PJF5 856 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ZNF605Q86T29 641 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 PHTF2Q8N3S3 785 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 PDCL2Q8N4E4 241 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 KIAA1958Q8N8K9 716 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 SETD7Q8WTS6 366 aaKnown RBP10.35□□□□□ -0.75
SCFD1-215ENST00000555259 KCNN1Q92952 543 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 GTF3C6Q969F1 213 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ZNF419Q96HQ0 510 aaPredicted RBP10.35□□□□□ -0.75
SCFD1-215ENST00000555259 PKMYT1Q99640 499 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ACBD6Q9BR61 282 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 RAB34Q9BZG1 259 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ZDHHC5Q9C0B5 715 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 ASB7Q9H672 318 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 DPP3Q9NY33 737 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 SUSD2Q9UGT4 822 aa10.35□□□□□ -0.75
SCFD1-215ENST00000555259 CYP8B1Q9UNU6 501 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms