RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PHBP35232 272 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 BRCC3P46736 316 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 CTCFP49711 727 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 CCL23P55773 120 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 SESN3P58005 492 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 DHX34Q14147 1143 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 KCTD17Q8N5Z5 321 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 ACTRT1Q8TDG2 376 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 PGBD4Q96DM1 585 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 PABPC5Q96DU9 382 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
ARHGEF40-206ENST00000555232 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 MEFVO15553 781 aaPredicted RBP12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 OR4Q2P0C623 313 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 MYBL1P10243 752 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 EPHB2P29323 1055 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 ARL2P36404 184 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 ETFBP38117 255 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 NOMO3P69849 1222 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 COBLL1Q53SF7 1204 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 CCDC97Q96F63 343 aaPredicted RBP12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 VPS11Q9H270 941 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 VTA1Q9NP79 307 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 FAM8A1Q9UBU6 413 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 CDY2AQ9Y6F7 541 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 NFASCO94856 1347 aa12.77□□□□□ -0.36
ARHGEF40-206ENST00000555232 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 TCP11X1B4DZS4 312 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 ASS1P00966 412 aaKnown RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 AMPD1P23109 780 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 MAGEA4P43358 317 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 ARL4CP56559 192 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 TFDP2Q14188 446 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 PIGHQ14442 188 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 NBPF20Q3BBV1 942 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZNF560Q96MR9 790 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 KIF9Q9HAQ2 790 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 ABCF3Q9NUQ8 709 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 MYH15Q9Y2K3 1946 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 ANKRD36CQ5JPF3 1778 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 RRN3P2A6NIE6 340 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 EDN1P05305 212 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 IRF1P10914 325 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 BDNFP23560 247 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 PPM1FP49593 454 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 AP3M2P53677 418 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 JAM2P57087 298 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 SNCBQ16143 134 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 TBC1D1Q86TI0 1168 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 RCOR2Q8IZ40 523 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 SPDL1Q96EA4 605 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 INTUQ9ULD6 942 aa12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
ARHGEF40-206ENST00000555232 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 KPNA7A9QM74 516 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 MSCO60682 206 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 THP07101 528 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 USP17L7P0C7H9 530 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 LMO2P25791 158 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 CHKAP35790 457 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 TSPY1Q01534 308 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 RGMBQ6NW40 437 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 SPOCD1Q6ZMY3 1216 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 MAML1Q92585 1016 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 APOL1O14791 398 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 AOC2O75106 756 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 MMP3P08254 477 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 PRLRP16471 622 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 SLC1A1P43005 524 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 FCGRTP55899 365 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 OVGP1Q12889 678 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 C6orf118Q5T5N4 469 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 ANKRD20A3Q5VUR7 823 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 BTBD8Q5XKL5 378 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 NXNQ6DKJ4 435 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZBED2Q9BTP6 218 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 PPP1R37O75864 691 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 LSP1P33241 339 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 SLC26A2P50443 739 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 ZNF618Q5T7W0 954 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
ARHGEF40-206ENST00000555232 C12orf42Q96LP6 360 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms