RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 FNTBP49356 437 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 NAP1L1P55209 391 aaKnown RBP11.85□□□□□ -0.51
SHMT2-216ENST00000554975 MYL7Q01449 175 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 SATB1Q01826 763 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 SIM2Q14190 667 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-216ENST00000554975 GAS6Q14393 721 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 SLC5A9Q2M3M2 681 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 PPM1LQ5SGD2 360 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 TANGO2Q6ICL3 276 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 ZNF720Q7Z2F6 126 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 FAM71BQ8TC56 605 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 ASAP3Q8TDY4 903 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 HASPINQ8TF76 798 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 ACCSQ96QU6 501 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 NELL2Q99435 816 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 COLEC11Q9BWP8 271 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 APOL6Q9BWW8 343 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 UBXN6Q9BZV1 441 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 C17orf75Q9HAS0 396 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 AGPAT3Q9NRZ7 376 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 ADAM28Q9UKQ2 775 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 CITO14578 2027 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 DSPP15924 2871 aaKnown RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 LRRIQ4A6NIV6 560 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 MOCS3O95396 460 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 FCARP24071 287 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 PON1P27169 355 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 PLA2G4AP47712 749 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 FMO5P49326 533 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 JAM2P57087 298 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 VSNL1P62760 191 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 TNNC1P63316 161 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 GFPT1Q06210 699 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 BFSP1Q12934 665 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 GRM2Q14416 872 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 SF3A2Q15428 464 aaKnown RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 TERF2Q15554 542 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 CCDC6Q16204 474 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 LIN9Q5TKA1 542 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 ZNF771Q7L3S4 317 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 GPR65Q8IYL9 337 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 NOA1Q8NC60 698 aaKnown RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 MCPH1Q8NEM0 835 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 SLC7A14Q8TBB6 771 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 FAM81BQ96LP2 452 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 PNKPQ96T60 521 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 CRACR2AQ9BSW2 395 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 NXF3Q9H4D5 531 aaKnown RBP11.84□□□□□ -0.51
SHMT2-216ENST00000554975 GPRC5CQ9NQ84 441 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 DMAC2Q9NW81 257 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 ZMIZ1Q9ULJ6 1067 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 NCANO14594 1321 aa11.84□□□□□ -0.51
SHMT2-216ENST00000554975 PMM2O15305 246 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 TGFB1I1O43294 461 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 TSPAN1O60635 241 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 EXOC3O60645 756 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 HIP1RO75146 1068 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 ECI2O75521 394 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 ABL1P00519 1130 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 PLS3P13797 630 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 CEBPBP17676 345 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 GLRA2P23416 452 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 AKAP5P24588 427 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 HOXA9P31269 272 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 HOXD13P35453 343 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 SOX5P35711 763 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 SMTNP53814 917 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 NRLP54845 237 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 PTENP60484 403 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 NNTQ13423 1086 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 CAPSQ13938 189 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 CASP8Q14790 479 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 PABPC1LQ4VXU2 614 aaKnown RBP11.83□□□□□ -0.52
SHMT2-216ENST00000554975 C8orf74Q6P047 294 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 EMBQ6PCB8 327 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-216ENST00000554975 LNX1Q8TBB1 728 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-216ENST00000554975 KIFAP3Q92845 792 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 PBKQ96KB5 322 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 SELENOOQ9BVL4 669 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 LMAN1LQ9HAT1 526 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 UBN1Q9NPG3 1134 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 C2orf42Q9NWW7 574 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 KLK14Q9P0G3 267 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 APEX2Q9UBZ4 518 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 L1RE1Q9UN81 338 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 MRPS17Q9Y2R5 130 aaKnown RBP11.83□□□□□ -0.52
SHMT2-216ENST00000554975 NBEAQ8NFP9 2946 aa11.83□□□□□ -0.52
SHMT2-216ENST00000554975 NUP205Q92621 2012 aa11.82□□□□□ -0.52
SHMT2-216ENST00000554975 K7ESF4 209 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms