RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 K7ENM7 598 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 MAGEA4P43358 317 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 TRIP13Q15645 432 aaPredicted RBP16.35■□□□□ 0.21
SYNE3-203ENST00000554873 CEP55Q53EZ4 464 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 DHRS4L2Q6PKH6 230 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 TMC7Q7Z402 723 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 ZNF276Q8N554 614 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 BBOF1Q8ND07 529 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 GRK7Q8WTQ7 553 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 COX4I2Q96KJ9 171 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 ZNF577Q9BSK1 485 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 NUP85Q9BW27 656 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 MRPL1Q9BYD6 325 aaKnown RBP16.35■□□□□ 0.21
SYNE3-203ENST00000554873 NMUR2Q9GZQ4 415 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 ADAMTS6Q9UKP5 1117 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 LRRC37AA6NMS7 1700 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 SPECC1L-ADORA2AF8WAN1 911 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 CYP26A1O43174 497 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 DENRO43583 198 aaKnown RBP16.35■□□□□ 0.21
SYNE3-203ENST00000554873 SPOPO43791 374 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 PEX1O43933 1283 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 DLDP09622 509 aaKnown RBP16.35■□□□□ 0.21
SYNE3-203ENST00000554873 GZMAP12544 262 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 ADRA1DP25100 572 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 IRX4P78413 519 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 RNF111Q6ZNA4 994 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 PYDC1Q8WXC3 89 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 CASP10Q92851 521 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 CCT7Q99832 543 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 VPS11Q9H270 941 aa16.35■□□□□ 0.21
SYNE3-203ENST00000554873 CCDC162PA2VCL2 907 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 CAPN14A8MX76 684 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 ENO1P06733 434 aaKnown RBP16.34■□□□□ 0.21
SYNE3-203ENST00000554873 CDH2P19022 906 aaPredicted RBP16.34■□□□□ 0.21
SYNE3-203ENST00000554873 VCPP55072 806 aaKnown RBP16.34■□□□□ 0.21
SYNE3-203ENST00000554873 ARL4CP56559 192 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 SLC47A2Q86VL8 602 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 FAM71AQ8IYT1 594 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 ZNF564Q8TBZ8 553 aaPredicted RBP16.34■□□□□ 0.21
SYNE3-203ENST00000554873 VTI1AQ96AJ9 217 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 SRPK1Q96SB4 655 aaKnown RBP16.34■□□□□ 0.21
SYNE3-203ENST00000554873 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 FSCN2O14926 492 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 CD48P09326 243 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 PDGFRBP09619 1106 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 POLR2MP0CAP2 368 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 NFKBIAP25963 317 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 TMED10P49755 219 aaKnown RBP16.34■□□□□ 0.21
SYNE3-203ENST00000554873 PADI6Q6TGC4 694 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 ALLCQ8N6M5 410 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 KREMEN1Q96MU8 473 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 BIRC8Q96P09 236 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 Q9H521 79 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 ZNF696Q9H7X3 374 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 UVRAGQ9P2Y5 699 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 TSC22D4Q9Y3Q8 395 aa16.34■□□□□ 0.21
SYNE3-203ENST00000554873 TNFAIP8O95379 198 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 CYP1A2P05177 515 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 ATP6V1B1P15313 513 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 HIRAP54198 1017 aaPredicted RBP16.33■□□□□ 0.21
SYNE3-203ENST00000554873 NCKAP1LP55160 1127 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 TLR1Q15399 786 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 CCDC153Q494R4 210 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 PCNX4Q63HM2 1172 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 AHI1Q8N157 1196 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 MAK16Q9BXY0 300 aaKnown RBP16.33■□□□□ 0.21
SYNE3-203ENST00000554873 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 TUT1Q9H6E5 874 aaKnown RBP16.33■□□□□ 0.21
SYNE3-203ENST00000554873 SELENONQ9NZV5 590 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 CEPT1Q9Y6K0 416 aa16.33■□□□□ 0.21
SYNE3-203ENST00000554873 A0A1W2PPM1 405 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 CLDN3O15551 220 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 PMLP29590 882 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 FDFT1P37268 417 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 NR1H2P55055 460 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 FMO1Q01740 532 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 TRIP10Q15642 601 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 EFHC1Q5JVL4 640 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 NSMFQ6X4W1 530 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 FOXP3Q9BZS1 431 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 TMEM117Q9H0C3 514 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 TAGLN3Q9UI15 199 aa16.33■□□□□ 0.2
SYNE3-203ENST00000554873 ADAM23O75077 832 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 MYL2P10916 166 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PLS3P13797 630 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 KRT4P19013 534 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 RRM1P23921 792 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 ECE1P42892 770 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 SNAPC2Q13487 334 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 GSTCDQ8NEC7 633 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PPP1R10Q96QC0 940 aaKnown RBP16.32■□□□□ 0.2
SYNE3-203ENST00000554873 RBM15Q96T37 977 aaKnown RBP eCLIP16.32■□□□□ 0.2
SYNE3-203ENST00000554873 MRIQ9BWK5 157 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 PPCSQ9HAB8 311 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 CHST7Q9NS84 486 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 TTLL13PA6NNM8 815 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 H3BSA7 217 aa16.32■□□□□ 0.2
SYNE3-203ENST00000554873 DDX39AO00148 427 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms