RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 GBP7Q8N8V2 638 aaPredicted RBP11.77□□□□□ -0.53
SRP54-205ENST00000554803 C12orf50Q8NA57 414 aaPredicted RBP11.77□□□□□ -0.53
SRP54-205ENST00000554803 SLC35G2Q8TBE7 412 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 UBLCP1Q8WVY7 318 aaPredicted RBP11.77□□□□□ -0.53
SRP54-205ENST00000554803 TATDN2Q93075 761 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 ZNF558Q96NG5 402 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 ADAM2Q99965 735 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 FGFBP2Q9BYJ0 223 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 INTS2Q9H0H0 1204 aaKnown RBP11.77□□□□□ -0.53
SRP54-205ENST00000554803 ELAC1Q9H777 363 aaKnown RBP11.77□□□□□ -0.53
SRP54-205ENST00000554803 HOMER3Q9NSC5 361 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 TMEM161AQ9NX61 479 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 LARSQ9P2J5 1176 aaKnown RBP11.77□□□□□ -0.53
SRP54-205ENST00000554803 UVRAGQ9P2Y5 699 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 DNAJC12Q9UKB3 198 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 CA14Q9ULX7 337 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 CAPN7Q9Y6W3 813 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
SRP54-205ENST00000554803 A0A1B0GUA9 196 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 DDX3YO15523 660 aaKnown RBP11.76□□□□□ -0.53
SRP54-205ENST00000554803 BUB1BO60566 1050 aaPredicted RBP11.76□□□□□ -0.53
SRP54-205ENST00000554803 RTN2O75298 545 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 FGGP02679 453 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 INSRRP14616 1297 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 EPCAMP16422 314 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 CTNNA2P26232 953 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 SLC8A1P32418 973 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 RDXP35241 583 aaKnown RBP11.76□□□□□ -0.53
SRP54-205ENST00000554803 PBX3P40426 434 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 CASP5P51878 434 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 GPC5P78333 572 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 GUCY1A3Q02108 690 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 DRAP1Q14919 205 aaPredicted RBP11.76□□□□□ -0.53
SRP54-205ENST00000554803 XKR9Q5GH70 373 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 SEL1L2Q5TEA6 688 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 TRMT10CQ7L0Y3 403 aaKnown RBP11.76□□□□□ -0.53
SRP54-205ENST00000554803 ENOSF1Q7L5Y1 443 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 GPR149Q86SP6 731 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 SH2D3CQ8N5H7 860 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 MYCT1Q8N699 235 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 COL26A1Q96A83 441 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 CASD1Q96PB1 797 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 STRA6Q9BX79 667 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 TMEM117Q9H0C3 514 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 DDX47Q9H0S4 455 aaKnown RBP11.76□□□□□ -0.53
SRP54-205ENST00000554803 ATP6V0A4Q9HBG4 840 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 AGPAT3Q9NRZ7 376 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 ANKEF1Q9NU02 776 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 SIT1Q9Y3P8 196 aa11.76□□□□□ -0.53
SRP54-205ENST00000554803 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 ZSCAN5CA6NGD5 496 aaPredicted RBP11.75□□□□□ -0.53
SRP54-205ENST00000554803 DAPK3O43293 454 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 DKC1O60832 514 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRP54-205ENST00000554803 DNAJC8O75937 253 aaPredicted RBP11.75□□□□□ -0.53
SRP54-205ENST00000554803 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
SRP54-205ENST00000554803 GLULP15104 373 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 TGM1P22735 817 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 GTF2H1P32780 548 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 FAM189BP81408 668 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 MTERF2Q49AM1 385 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 PPM1JQ5JR12 505 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 ERMARDQ5T6L9 678 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 PADI6Q6TGC4 694 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 LRRC43Q8N309 656 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 BBOF1Q8ND07 529 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
SRP54-205ENST00000554803 SLC22A17Q8WUG5 538 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 TRAPPC12Q8WVT3 735 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 CHMP6Q96FZ7 201 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 CEP170P1Q96L14 293 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 ACCSQ96QU6 501 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 AGPAT1Q99943 283 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 NCAPGQ9BPX3 1015 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 ZDHHC18Q9NUE0 388 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 AMACRQ9UHK6 382 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
SRP54-205ENST00000554803 EXOC7Q9UPT5 735 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 FLNBO75369 2602 aaKnown RBP11.75□□□□□ -0.53
SRP54-205ENST00000554803 DOCK6Q96HP0 2047 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 SPEGQ15772 3267 aa11.75□□□□□ -0.53
SRP54-205ENST00000554803 SMIM35A0A1B0GVV1 85 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 ZBTB42B2RXF5 422 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 TTI1O43156 1089 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 HOXA2O43364 376 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 HIP1RO75146 1068 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 RASSF9O75901 435 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 CXCL14O95715 111 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 SRFP11831 508 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 RARGP13631 454 aa11.74□□□□□ -0.53
SRP54-205ENST00000554803 CA8P35219 290 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms