RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 DUSP15Q9H1R2 295 aaPredicted RBP14.97□□□□□ -0.01
XRCC3-207ENST00000554774 TNMDQ9H2S6 317 aa14.97□□□□□ -0.01
XRCC3-207ENST00000554774 SNX25Q9H3E2 840 aa14.97□□□□□ -0.01
XRCC3-207ENST00000554774 ZSCAN16Q9H4T2 348 aaPredicted RBP14.97□□□□□ -0.01
XRCC3-207ENST00000554774 KIAA1586Q9HCI6 787 aa14.97□□□□□ -0.01
XRCC3-207ENST00000554774 LEFTY2O00292 366 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 TRIM66O15016 1216 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 DCLK1O15075 740 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 RHOBTB1O94844 696 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 ABL1P00519 1130 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 DLATP10515 647 aaKnown RBP14.96□□□□□ -0.01
XRCC3-207ENST00000554774 TCF3P15923 654 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 TNNI1P19237 187 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 HOXD13P35453 343 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 NASPP49321 788 aaPredicted RBP14.96□□□□□ -0.01
XRCC3-207ENST00000554774 SEC13P55735 322 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 ASIC1P78348 528 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 ELF2Q15723 593 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 MDH1BQ5I0G3 518 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 TRAPPC11Q7Z392 1133 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 TSTD1Q8NFU3 115 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 CCDC26Q8TAB7 109 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 MYCBPAPQ8TBZ2 947 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 PCED1BQ96HM7 432 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 CEP295NLQ96MC4 621 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 FNBP1Q96RU3 617 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 MRPL45Q9BRJ2 306 aaKnown RBP14.96□□□□□ -0.01
XRCC3-207ENST00000554774 TRIM9Q9C026 710 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 VPS45Q9NRW7 570 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 EHD2Q9NZN4 543 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 EBF1Q9UH73 591 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 INVSQ9Y283 1065 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 CHD8Q9HCK8 2581 aa14.96□□□□□ -0.01
XRCC3-207ENST00000554774 CNOT1A5YKK6 2376 aaKnown RBP14.96□□□□□ -0.02
XRCC3-207ENST00000554774 F8VP50 259 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 CLIC2O15247 247 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 EIF3DO15371 548 aaKnown RBP eCLIP14.95□□□□□ -0.02
XRCC3-207ENST00000554774 STX6O43752 255 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 CST3P01034 146 aaPredicted RBP14.95□□□□□ -0.02
XRCC3-207ENST00000554774 PFKLP17858 780 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 GBP1P32455 592 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 GNL1P36915 607 aaPredicted RBP14.95□□□□□ -0.02
XRCC3-207ENST00000554774 ZXDBP98169 803 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 AMPD3Q01432 767 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 CREB5Q02930 508 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 E2F4Q16254 413 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 SNRNP35Q16560 246 aaKnown RBP14.95□□□□□ -0.02
XRCC3-207ENST00000554774 ST3GAL2Q16842 350 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 C2orf27AQ580R0 203 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 N4BP2L1Q5TBK1 243 aaPredicted RBP14.95□□□□□ -0.02
XRCC3-207ENST00000554774 TCEAL6Q6IPX3 200 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 LINC00301Q8NCQ3 95 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 OR6B3Q8NGW1 331 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 TCEAL3Q969E4 200 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 DHX58Q96C10 678 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 INTS4Q96HW7 963 aaKnown RBP14.95□□□□□ -0.02
XRCC3-207ENST00000554774 KBTBD4Q9NVX7 518 aa14.95□□□□□ -0.02
XRCC3-207ENST00000554774 ZNF840PA6NDX5 716 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 K7EQS6 105 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 TM4SF5O14894 197 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 SPTLC2O15270 562 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 OPRD1P41143 372 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 CYP2J2P51589 502 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 TNNC1P63316 161 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 SLC7A9P82251 487 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 IFRD2Q12894 506 aaPredicted RBP14.94□□□□□ -0.02
XRCC3-207ENST00000554774 USP39Q53GS9 565 aaKnown RBP14.94□□□□□ -0.02
XRCC3-207ENST00000554774 FAM26FQ5R3K3 315 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 TDRD10Q5VZ19 366 aaKnown RBP14.94□□□□□ -0.02
XRCC3-207ENST00000554774 RNF43Q68DV7 783 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 FILIP1Q7Z7B0 1213 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 NELFCDQ8IXH7 590 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 ZNF507Q8TCN5 953 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 USP33Q8TEY7 942 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 CCDC127Q96BQ5 260 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 C8orf48Q96LL4 319 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 CGRRF1Q99675 332 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 TPSD1Q9BZJ3 242 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 RNF38Q9H0F5 515 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 CUEDC2Q9H467 287 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 AGPAT3Q9NRZ7 376 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 SMPD4Q9NXE4 827 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 TFIP11Q9UBB9 837 aaKnown RBP14.94□□□□□ -0.02
XRCC3-207ENST00000554774 NME7Q9Y5B8 376 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 CPQQ9Y646 472 aa14.94□□□□□ -0.02
XRCC3-207ENST00000554774 MAP1BP46821 2468 aaKnown RBP14.94□□□□□ -0.02
XRCC3-207ENST00000554774 ANTXRLA6NF34 631 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 SCAMP3O14828 347 aaKnown RBP14.93□□□□□ -0.02
XRCC3-207ENST00000554774 TGFB1I1O43294 461 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 TACC1O75410 805 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 CAVIN2O95810 425 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 CYP17A1P05093 508 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 PTPN1P18031 435 aaKnown RBP14.93□□□□□ -0.02
XRCC3-207ENST00000554774 PPP3CCP48454 512 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 NOP14P78316 857 aaKnown RBP14.93□□□□□ -0.02
XRCC3-207ENST00000554774 CYP24A1Q07973 514 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 TAF10Q12962 218 aa14.93□□□□□ -0.02
XRCC3-207ENST00000554774 TRPC3Q13507 836 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms