RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CSGALNACT1Q8TDX6 532 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 TIGD1Q96MW7 591 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 SLC46A2Q9BY10 475 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 ELOVL4Q9GZR5 314 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 C8orf33Q9H7E9 229 aaPredicted RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 HOOK1Q9UJC3 728 aaKnown RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAGED2Q9UNF1 606 aaPredicted RBP11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 PIAS3Q9Y6X2 628 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 CHD6Q8TD26 2715 aa11.1□□□□□ -0.63
PTCD2P1-201ENST00000554393 A8MXQ7 604 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 TADA3O75528 432 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 AKAP3O75969 853 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 SMC2O95347 1197 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 ASS1P00966 412 aaKnown RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 CD72P21854 359 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 ANXA13P27216 316 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 PSMC2P35998 433 aaKnown RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 PPP3CCP48454 512 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 VAMP7P51809 220 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 CYP27A1Q02318 531 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 ADAM9Q13443 819 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 PNOCQ13519 176 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 MDH1BQ5I0G3 518 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 C1orf220Q5T0J3 134 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 SDHAF4Q5VUM1 108 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 SV2AQ7L0J3 742 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 SCN4BQ8IWT1 228 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 TNIP3Q96KP6 325 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 C8orf48Q96LL4 319 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 LRRC3BQ96PB8 259 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 EPAS1Q99814 870 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 TTLL2Q9BWV7 592 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 TDP1Q9NUW8 608 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 THG1LQ9NWX6 298 aaKnown RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 FBXO4Q9UKT5 387 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 MTF2Q9Y483 593 aaPredicted RBP11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 NME7Q9Y5B8 376 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 GVINP1Q7Z2Y8 2422 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
PTCD2P1-201ENST00000554393 MED19A0JLT2 244 aaPredicted RBP11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 LRRN2O75325 713 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 KRT13P13646 458 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 BDNFP23560 247 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 GTF2H1P32780 548 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 GRIK1P39086 918 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 PDE6CP51160 858 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 FZD5Q13467 585 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF528Q3MIS6 628 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZC3H14Q6PJT7 736 aaKnown RBP11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 DENND5BQ6ZUT9 1274 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 RALGPS2Q86X27 583 aaPredicted RBP11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 STKLD1Q8NE28 680 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 FAM3CQ92520 227 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 USP13Q92995 863 aaPredicted RBP11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 FAXDC2Q96IV6 333 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 CNTNAP3BQ96NU0 1288 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 CNTNAP3Q9BZ76 1288 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 IMPG2Q9BZV3 1241 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 PCDHGA10Q9Y5H3 936 aa11.08□□□□□ -0.64
PTCD2P1-201ENST00000554393 DMXL1Q9Y485 3027 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 PTPRZ1P23471 2315 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 VPS13AQ96RL7 3174 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 MYO16Q9Y6X6 1858 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRAV19A0A0A6YYK7 116 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 F8VP50 259 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 LAMTOR5O43504 91 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 HLA-DRAP01903 254 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 USP17L7P0C7H9 530 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 TCF3P15923 654 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 PPP1R2P41236 205 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 ASPAP45381 313 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 KPNA1P52294 538 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 CDH8P55286 799 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 COL9A2Q14055 689 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 TXNDC8Q6A555 127 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 FRMD5Q7Z6J6 570 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 UNC93AQ86WB7 457 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 NKD2Q969F2 451 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 SMARCE1Q969G3 411 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 FAM83CQ9BQN1 747 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 SMG9Q9H0W8 520 aaKnown RBP11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 CHRDQ9H2X0 955 aa11.07□□□□□ -0.64
PTCD2P1-201ENST00000554393 DPEP3Q9H4B8 488 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms