RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TARBP2Q15633 366 aaKnown RBP6.41□□□□□ -1.38
ATXN3-226ENST00000554350 ODR4Q5SWX8 454 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 LIPIQ6XZB0 460 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 SPATA31D4Q6ZUB0 917 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 MTSS1LQ765P7 747 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 ITPRIPQ8IWB1 547 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 CMASQ8NFW8 434 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-226ENST00000554350 SPATA18Q8TC71 538 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 PHF20Q9BVI0 1012 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 LMAN1LQ9HAT1 526 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 METTL5Q9NRN9 209 aaKnown RBP6.41□□□□□ -1.38
ATXN3-226ENST00000554350 VPS45Q9NRW7 570 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 SUSD2Q9UGT4 822 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 SF3B6Q9Y3B4 125 aaKnown RBP6.41□□□□□ -1.38
ATXN3-226ENST00000554350 PCDHA1Q9Y5I3 950 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 ABCB11O95342 1321 aa6.41□□□□□ -1.38
ATXN3-226ENST00000554350 TEP1Q99973 2627 aaKnown RBP6.41□□□□□ -1.38
ATXN3-226ENST00000554350 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 MBLAC1A4D2B0 266 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 DHX16O60231 1041 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 RANBP6O60518 1105 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 PPP1R11O60927 126 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 KRT38O76015 456 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 GLUD1P00367 558 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 NTRK1P04629 796 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 CSRP1P21291 193 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 CCND2P30279 289 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 L1CAMP32004 1257 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 AK2P54819 239 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 SIM1P81133 766 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 NEDD9Q14511 834 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 RTP5Q14D33 572 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 UBE3CQ15386 1083 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 CDC37Q16543 378 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 BMP2KLQ5H9B9 411 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 MARCH8Q5T0T0 291 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 ZSCAN25Q6NSZ9 544 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 GIMAP6Q6P9H5 292 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 METTL7BQ6UX53 244 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 CYP26C1Q6V0L0 522 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 CACNA2D4Q7Z3S7 1137 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 DDX53Q86TM3 631 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 KBTBD6Q86V97 674 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 TMEM173Q86WV6 379 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 CHCHD4Q8N4Q1 142 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 LOXL4Q96JB6 756 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 STRBPQ96SI9 672 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 PDCD2LQ9BRP1 358 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 IER2Q9BTL4 223 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 RNF38Q9H0F5 515 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 KLHL25Q9H0H3 589 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 BOLA2Q9H3K6 86 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 SLC32A1Q9H598 525 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 ELAC1Q9H777 363 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 RXFP1Q9HBX9 757 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 IL1RAPL2Q9NP60 686 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 DPP7Q9UHL4 492 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 ST3GAL5Q9UNP4 418 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 TNNQ9UQP3 1299 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 MRPL11Q9Y3B7 192 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.38
ATXN3-226ENST00000554350 TELO2Q9Y4R8 837 aa6.4□□□□□ -1.38
ATXN3-226ENST00000554350 MYH7P12883 1935 aa6.4□□□□□ -1.39
ATXN3-226ENST00000554350 SHROOM3Q8TF72 1996 aa6.4□□□□□ -1.39
ATXN3-226ENST00000554350 ACACAQ13085 2346 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 PIEZO2Q9H5I5 2752 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 SH3D21A4FU49 640 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 RRN3P2A6NIE6 340 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 AURKAO14965 403 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 RPP40O75818 363 aaKnown RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 IFIT2P09913 472 aaKnown RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 GOLGA8HP0CJ92 632 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 TCF7P36402 384 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 KCNC1P48547 511 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 POU4F1Q01851 419 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 CREB5Q02930 508 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 RNASELQ05823 741 aaKnown RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 PGM5Q15124 567 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 GNPTABQ3T906 1256 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 FBXW10Q5XX13 1052 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 CHD1LQ86WJ1 897 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 SKAP1Q86WV1 359 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 ZNF843Q8N446 348 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 IL31RAQ8NI17 732 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 MDM1Q8TC05 714 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 SSH3Q8TE77 659 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 TRAPPC12Q8WVT3 735 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 IGSF21Q96ID5 467 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 MRPL9Q9BYD2 267 aaKnown RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 UBA5Q9GZZ9 404 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 GBP3Q9H0R5 595 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 CPVLQ9H3G5 476 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 TMEM9BQ9NQ34 198 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 IL17RBQ9NRM6 502 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 MRPL17Q9NRX2 175 aaKnown RBP6.39□□□□□ -1.39
ATXN3-226ENST00000554350 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 TCP11L1Q9NUJ3 509 aa6.39□□□□□ -1.39
ATXN3-226ENST00000554350 ERAP1Q9NZ08 941 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms