RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ZMYND12Q9H0C1 365 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 EPN3Q9H201 632 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 BLZF1Q9H2G9 400 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 NDST4Q9H3R1 872 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 CNOT10Q9H9A5 744 aaKnown RBP6.37□□□□□ -1.39
VPS33B-203ENST00000554264 SLC28A3Q9HAS3 691 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 GPRC5CQ9NQ84 441 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 GDF3Q9NR23 364 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 BARHL2Q9NY43 387 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 SWAP70Q9UH65 585 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 GPR160Q9UJ42 338 aa6.37□□□□□ -1.39
VPS33B-203ENST00000554264 LAMA2P24043 3122 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 A0A1W2PRG0 241 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 C2orf71A6NGG8 1288 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 AGPSO00116 658 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 MPHOSPH10O00566 681 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 PRKAB2O43741 272 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 FLOT1O75955 427 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 FAM107AO95990 144 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 RDXP35241 583 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 HSPA9P38646 679 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GRIA2P42262 883 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 ACLYP53396 1101 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GYS2P54840 703 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 EIF3BP55884 814 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GNGT1P63211 74 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 ASIC1P78348 528 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 KCTD2Q14681 263 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 SLMAPQ14BN4 828 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 SLC14A2Q15849 920 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 MIIPQ5JXC2 388 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 TMEM240Q5SV17 173 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GTF2IRD2BQ6EKJ0 949 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 RCSD1Q6JBY9 416 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 PRR23BQ6ZRT6 265 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 TMEM179Q6ZVK1 233 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 EEPD1Q7L9B9 569 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 NEK8Q86SG6 692 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GTF2IRD2Q86UP8 949 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 VPS36Q86VN1 386 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 SYCE1Q8N0S2 351 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 LILRA2Q8N149 483 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 MIGA1Q8NAN2 632 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 PCSK9Q8NBP7 692 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 BTN2A2Q8WVV5 523 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 TAF4BQ92750 862 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 COPS5Q92905 334 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 ATP6V1G3Q96LB4 118 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GLT1D1Q96MS3 346 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 NAP1L3Q99457 506 aaPredicted RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 MMP19Q99542 508 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 NT5C3AQ9H0P0 336 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 SLITRK6Q9H5Y7 841 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 LRWD1Q9UFC0 647 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 SEC63Q9UGP8 760 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 LCMT1Q9UIC8 334 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 FBXL5Q9UKA1 691 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 TBX21Q9UL17 535 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 INTUQ9ULD6 942 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 SIK3Q9Y2K2 1263 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 GDAQ9Y2T3 454 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 YBX2Q9Y2T7 364 aaKnown RBP6.36□□□□□ -1.39
VPS33B-203ENST00000554264 MSRB2Q9Y3D2 182 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 FOCADQ5VW36 1801 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
VPS33B-203ENST00000554264 CDH23Q9H251 3354 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 GRIN2DO15399 1336 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 A0A0A6YYK5 440 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 A0A1W2PQU0 124 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 MACROD2A1Z1Q3 448 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 GRXCR1A8MXD5 290 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 H0YHG0 523 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 NOP56O00567 594 aaKnown RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 CHUKO15111 745 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 WDR46O15213 610 aaKnown RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PPP1R11O60927 126 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PAEPP09466 180 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 MSL3P1P0C860 447 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 GCFC2P16383 781 aaKnown RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 NR1D1P20393 614 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 CST5P28325 142 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 SLC8A1P32418 973 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 CCT5P48643 541 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 NPEPPSP55786 919 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 FKBP3Q00688 224 aaKnown RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 GABPAQ06546 454 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 SERINC3Q13530 473 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 TMEM132BQ14DG7 1078 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 NAB2Q15742 525 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 KCNA10Q16322 511 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 CDC37Q16543 378 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PTPN21Q16825 1174 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 EDRF1Q3B7T1 1238 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 EARS2Q5JPH6 523 aaKnown RBP6.35□□□□□ -1.39
VPS33B-203ENST00000554264 AGBL2Q5U5Z8 902 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 SFMBT2Q5VUG0 894 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 HAUS3Q68CZ6 603 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 OGFOD2Q6N063 350 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 PDXDC1Q6P996 788 aa6.35□□□□□ -1.39
VPS33B-203ENST00000554264 ZNF365Q70YC5 407 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms