RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TRIM66O15016 1216 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 BUB1BO60566 1050 aaPredicted RBP8.06□□□□□ -1.12
TDP1-209ENST00000554180 PALMO75781 387 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 FGF18O76093 207 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 FBXO21O94952 628 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 ERBB2P04626 1255 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 CPB1P15086 417 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 CASQ1P31415 396 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 MAN1A1P33908 653 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SLC1A1P43005 524 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 UBE3AQ05086 875 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 CCDC142Q17RM4 750 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SLC39A12Q504Y0 691 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 RAB41Q5JT25 222 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 DNTTIP2Q5QJE6 756 aaKnown RBP8.06□□□□□ -1.12
TDP1-209ENST00000554180 PPP1R15BQ5SWA1 713 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 DCUN1D2Q6PH85 259 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 OLFML1Q6UWY5 402 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SYT10Q6XYQ8 523 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SLC26A9Q7LBE3 791 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 DAAM2Q86T65 1068 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 PIGZQ86VD9 579 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 LRRTM3Q86VH5 581 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 FBXO22Q8NEZ5 403 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 FEZF2Q8TBJ5 459 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SPPL2BQ8TCT7 592 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 RIN2Q8WYP3 895 aaPredicted RBP8.06□□□□□ -1.12
TDP1-209ENST00000554180 C8orf48Q96LL4 319 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SAMD11Q96NU1 681 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 NAPGQ99747 312 aaPredicted RBP8.06□□□□□ -1.12
TDP1-209ENST00000554180 SMOQ99835 787 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 LPIN3Q9BQK8 851 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 SELENOOQ9BVL4 669 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 RRAGDQ9NQL2 400 aaPredicted RBP8.06□□□□□ -1.12
TDP1-209ENST00000554180 CNGB3Q9NQW8 809 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 TMLHEQ9NVH6 421 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 ASNSD1Q9NWL6 643 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 ANAPC7Q9UJX3 599 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 MAFFQ9ULX9 164 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 PCDHB5Q9Y5E4 795 aa8.06□□□□□ -1.12
TDP1-209ENST00000554180 MTMR11A4FU01 709 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 LINC01553A4QN01 128 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TMEM191CA6NGB0 347 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 MIF4GDA9UHW6 222 aaKnown RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 HHLA1C9JL84 531 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TULP2O00295 520 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 FANCGO15287 622 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 PAPSS1O43252 624 aaPredicted RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 PROSCO94903 275 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 RB1P06400 928 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 GLI1P08151 1106 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 CTSAP10619 480 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 KRT3P12035 628 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 DESP17661 470 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 BDNFP23560 247 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 BMPR1AP36894 532 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 RGS7P49802 495 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 MAP3K7CLP57077 242 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 SLC6A3Q01959 620 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 ROR1Q01973 937 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 ADIGQ0VDE8 80 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TUBB2AQ13885 445 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 ACAP1Q15027 740 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 C2CD6Q53TS8 623 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 EFHC1Q5JVL4 640 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 C9orf50Q5SZB4 431 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 FAM102AQ5T9C2 384 aaPredicted RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 CYP4A22Q5TCH4 519 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 PAPD7Q5XG87 772 aaKnown RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 TPGS2Q68CL5 300 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 FAM183BPQ6ZVS7 135 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TAS1R1Q7RTX1 841 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 PEX26Q7Z412 305 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 VPS52Q8N1B4 723 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 SIX6OS1Q8N1H7 587 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 NIPA2Q8N8Q9 360 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 ZMIZ2Q8NF64 920 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 IRGQQ8WZA9 623 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 B3GALT6Q96L58 329 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 MCEEQ96PE7 176 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TMEM209Q96SK2 561 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 GDF15Q99988 308 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 C11orf84Q9BUA3 381 aaPredicted RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 TUBB2BQ9BVA1 445 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TRIM62Q9BVG3 475 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 ZBP1Q9H171 429 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 LRRC4Q9HBW1 653 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 MRPL17Q9NRX2 175 aaKnown RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 FNIP2Q9P278 1114 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 TJP2Q9UDY2 1190 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 AFF4Q9UHB7 1163 aaKnown RBP8.05□□□□□ -1.12
TDP1-209ENST00000554180 IP6K2Q9UHH9 426 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 PCDHA11Q9Y5I1 949 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 IRAK3Q9Y616 596 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 CDY1Q9Y6F8 540 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 VWA8A3KMH1 1905 aa8.05□□□□□ -1.12
TDP1-209ENST00000554180 WDR27A2RRH5 827 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms