RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 DENND1CQ8IV53 801 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DAW1Q8N136 415 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CFAP52Q8N1V2 620 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CARNMT1Q8N4J0 409 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PNPLA1Q8N8W4 532 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SMRP1Q8NCR6 262 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 OR2I1PQ8NGU4 316 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 BPIFB1Q8TDL5 484 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 P2RX5Q93086 422 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TCEAL3Q969E4 200 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MYLPFQ96A32 169 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RNF25Q96BH1 459 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 AK8Q96MA6 479 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MMTAG2Q9BU76 263 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM9Q9C026 710 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NUP62CLQ9H1M0 184 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DEF6Q9H4E7 631 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TAB2Q9NYJ8 693 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MYO1AQ9UBC5 1043 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SFMBT1Q9UHJ3 866 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CDH7Q9ULB5 785 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 STRIP2Q9ULQ0 834 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TNFSF13BQ9Y275 285 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 COMMD10Q9Y6G5 202 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PKD1L2Q7Z442 2459 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 COL1A2P08123 1366 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 DDX60LQ5H9U9 1706 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 UNC13CQ8NB66 2214 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 A0A087X0B3 334 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TRAV19A0A0A6YYK7 116 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MEI4A8MW99 385 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 BHMG1C9JSJ3 638 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 LAD1O00515 517 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MSI1O43347 362 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 EXTL3O43909 919 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TLR5O60602 858 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 PEX14O75381 377 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 FSBPO95073 299 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 PCDH8O95206 1070 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MAP3K6O95382 1288 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 IL1BP01584 269 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 HLA-DRAP01903 254 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 CYBBP04839 570 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 EPHX1P07099 455 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 FAM200BP0CF97 657 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MCF2P10911 925 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 ATF2P15336 505 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 GAP43P17677 238 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 ABCB4P21439 1286 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 CYP3A7P24462 503 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 YWHAQP27348 245 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 VAMP7P51809 220 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 NDST1P52848 882 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 GYS2P54840 703 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 ST8SIA6P61647 398 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 ADAM17P78536 824 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 HTRA4P83105 476 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 SEMG2Q02383 582 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 APBA1Q02410 837 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 RESTQ13127 1097 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 PPP2R5DQ14738 602 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 STARD3Q14849 445 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 SMAD2Q15796 467 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 KNOP1Q1ED39 458 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 LEXMQ3ZCV2 418 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 FAM78AQ5JUQ0 283 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 C9orf57Q5W0N0 161 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 SCARA3Q6AZY7 606 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 RFWD3Q6PCD5 774 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 LAYNQ6UX15 382 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MMS22LQ6ZRQ5 1243 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TFAP2DQ7Z6R9 452 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 OTUD6BQ8N6M0 293 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TXNDC5Q8NBS9 432 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 DAGLBQ8NCG7 672 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 RPLP0P6Q8NHW5 317 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 CXorf38Q8TB03 319 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 LNX1Q8TBB1 728 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TAS1R2Q8TE23 839 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 SPIRE2Q8WWL2 714 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 NELFBQ8WX92 580 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 JPH3Q8WXH2 748 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 ANP32BQ92688 251 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 CHFRQ96EP1 664 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 PAGE5Q96GU1 130 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TNIP3Q96KP6 325 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 SLC22A12Q96S37 553 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 KIF2CQ99661 725 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MRPL45Q9BRJ2 306 aaKnown RBP2.65□□□□□ -1.98
PRPF39-205ENST00000554081 SLC6A17Q9H1V8 727 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 ARRDC1-AS1Q9H2J1 176 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 FZD8Q9H461 694 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MTG2Q9H4K7 406 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 BLOC1S4Q9NUP1 217 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 TDP1Q9NUW8 608 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 MAP10Q9P2G4 905 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 DEC1Q9P2X7 70 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 L1RE1Q9UN81 338 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 CYP8B1Q9UNU6 501 aa2.65□□□□□ -1.98
PRPF39-205ENST00000554081 DOLKQ9UPQ8 538 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms