RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 NUF2Q9BZD4 464 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 VPS11Q9H270 941 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 HIPK3Q9H422 1215 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 DNAJC18Q9H819 358 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 SIX2Q9NPC8 291 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 BLOC1S4Q9NUP1 217 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 FKBP14Q9NWM8 211 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 C6orf203Q9P0P8 240 aaPredicted RBP9.96□□□□□ -0.81
SIX4-202ENST00000554079 SOX13Q9UN79 622 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 SATB2Q9UPW6 733 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 CORINQ9Y5Q5 1042 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 ALG6Q9Y672 507 aa9.96□□□□□ -0.81
SIX4-202ENST00000554079 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.82
SIX4-202ENST00000554079 M0R2N6 131 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ATE1O95260 518 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 VEGFAP15692 232 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 KRT15P19012 456 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 KRT4P19013 534 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 RPA1P27694 616 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 BMXP51813 675 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ATP6V0D1P61421 351 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 KCNH2Q12809 1159 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 SF3B3Q15393 1217 aaKnown RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 RABGAP1LQ5R372 815 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 GJC2Q5T442 439 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 C6orf52Q5T4I8 152 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 AGAP7PQ5VUJ5 663 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 C4orf22Q6V702 233 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ANKRD13DQ6ZTN6 518 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 KBTBD6Q86V97 674 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 CHERPQ8IWX8 916 aaKnown RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 TRIML2Q8N7C3 387 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 C2orf49Q9BVC5 232 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 MROQ9BYG7 248 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ZNF341Q9BYN7 854 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 KLHL25Q9H0H3 589 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 MOSPD1Q9UJG1 213 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 PSMD13Q9UNM6 376 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 RNF11Q9Y3C5 154 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 SCINQ9Y6U3 715 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 MAST2Q6P0Q8 1798 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 FAM237BA0A1B0GVD1 139 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 TRIM64BA6NI03 449 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 A8MU76 341 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 E5RJQ4 531 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ATP5J2-PTCD1G3V325 749 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 LAD1O00515 517 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 B4GALT4O60513 344 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ICMTO60725 284 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 BMP10O95393 424 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 KRT75O95678 551 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 CD247P20963 164 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 CXCR2P25025 360 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 TBCCQ15814 346 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ZNF530Q6P9A1 599 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 SYDE1Q6ZW31 735 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 PRPF39Q86UA1 669 aaKnown RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 CHSY1Q86X52 802 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 DGKHQ86XP1 1220 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 CLVS1Q8IUQ0 354 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 LSMEM1Q8N8F7 131 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ADAMTS16Q8TE57 1224 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 NLRP4Q96MN2 994 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 IMPG2Q9BZV3 1241 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 INO80BQ9C086 356 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 CNGB3Q9NQW8 809 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 EPS15L1Q9UBC2 864 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 PPP1R1BQ9UD71 204 aaPredicted RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 ANAPC5Q9UJX4 755 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 ZBTB21Q9ULJ3 1066 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 GNEQ9Y223 722 aaKnown RBP9.95□□□□□ -0.82
SIX4-202ENST00000554079 PCDHGA8Q9Y5G5 932 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 UBR2Q8IWV8 1755 aa9.95□□□□□ -0.82
SIX4-202ENST00000554079 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ARHGAP42A6NI28 874 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 GSG1L2A8MUP6 293 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CENPBD1B2RD01 187 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CFAP99D6REC4 459 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 POC1B-GALNT4F8VUJ3 575 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 H3BNH8 94 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 KPNA4O00629 521 aaPredicted RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 XPO1O14980 1071 aaKnown RBP9.94□□□□□ -0.82
SIX4-202ENST00000554079 TM9SF1O15321 606 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 TRPA1O75762 1119 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 DHRS4L1P0CG22 281 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 LMNB1P20700 586 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 SLC25A3Q00325 362 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CHRNEQ04844 493 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 GALNT2Q10471 571 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 ADGRE1Q14246 886 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CLEC16AQ2KHT3 1053 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 TRIM16LQ309B1 348 aa9.94□□□□□ -0.82
SIX4-202ENST00000554079 CCDC58Q4VC31 144 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms