RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CNOT6LQ96LI5 555 aaKnown RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 GCNAQ96QF7 691 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 HAPLN2Q9GZV7 340 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 NUP62CLQ9H1M0 184 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SLC32A1Q9H598 525 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 ECT2Q9H8V3 914 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 TBC1D7Q9P0N9 293 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 GPSM3Q9Y4H4 160 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 TSC2P49815 1807 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 ANO9A1A5B4 782 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 LACTBL1A8MY62 500 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 PPEF2O14830 753 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KIAA0391O15091 583 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 XPOTO43592 962 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CXCL8P10145 99 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 ODC1P11926 461 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 BCKDHBP21953 392 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 GBP1P32455 592 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 DPP6P42658 865 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 LIG4P49917 911 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CASP5P51878 434 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 DGKEP52429 567 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 POU5F1Q01860 360 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 STK4Q13043 487 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KNOP1Q1ED39 458 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KLHL40Q2TBA0 621 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SKOR2Q2VWA4 1001 aaPredicted RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SLC39A12Q504Y0 691 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 ZC2HC1CQ53FD0 456 aaPredicted RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 ZNF658Q5TYW1 1059 aaPredicted RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 NAIF1Q69YI7 327 aaPredicted RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 TXNDC8Q6A555 127 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CC2D1AQ6P1N0 951 aaPredicted RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SLC23A3Q6PIS1 610 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CYP2U1Q7Z449 544 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 LRRTM3Q86VH5 581 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CD302Q8IX05 232 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SYCP3Q8IZU3 236 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 GUF1Q8N442 669 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 MAB21L3Q8N8X9 362 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KIAA0895Q8NCT3 520 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 TSTD1Q8NFU3 115 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 GOLGA5Q8TBA6 731 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 USP33Q8TEY7 942 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 OSCP1Q8WVF1 389 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SCFD1Q8WVM8 642 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SYAP1Q96A49 352 aaPredicted RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KIF12Q96FN5 646 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 BICD1Q96G01 975 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 MYRFLQ96LU7 910 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 FGFBP2Q9BYJ0 223 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 SLC39A2Q9NP94 309 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KIAA1468Q9P260 1216 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 CGNQ9P2M7 1197 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 KLK13Q9UKR3 277 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 DSEQ9UL01 958 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 STYXL1Q9Y6J8 313 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 GCN1Q92616 2671 aaKnown RBP8.29□□□□□ -1.08
ABCD4-220ENST00000553998 RALGAPA1Q6GYQ0 2036 aa8.29□□□□□ -1.08
ABCD4-220ENST00000553998 A0A0A0MRY4 1105 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 K7EQS6 105 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 PRPF6O94906 941 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 CHRM1P11229 460 aaPredicted RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 GARTP22102 1010 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 HOXD12P35452 270 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 P2RY2P41231 377 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 SPAG1Q07617 926 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 BFSP1Q12934 665 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 HNRNPDQ14103 355 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 MORC3Q14149 939 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 MTF1Q14872 753 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 ZNF77Q15935 545 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 ENOX2Q16206 610 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 TAF12Q16514 161 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 CRY1Q16526 586 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 CAMK4Q16566 473 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 EML3Q32P44 896 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 MGAT5BQ3V5L5 792 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 TRIM61Q5EBN2 209 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 CCDC183Q5T5S1 534 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 C9orf57Q5W0N0 161 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 RBM43Q6ZSC3 357 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 HS2ST1Q7LGA3 356 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 RAB44Q7Z6P3 723 aaPredicted RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 SYT12Q8IV01 421 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 KIAA1958Q8N8K9 716 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 TMEM174Q8WUU8 243 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 PIGKQ92643 395 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 ATP2A3Q93084 1043 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 HPS3Q969F9 1004 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 FNBP1Q96RU3 617 aa8.28□□□□□ -1.08
ABCD4-220ENST00000553998 SEPT5Q99719 369 aaPredicted RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 NUSAP1Q9BXS6 441 aaKnown RBP8.28□□□□□ -1.08
ABCD4-220ENST00000553998 TMEM74BQ9NUR3 256 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms