RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 OR6B3Q8NGW1 331 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 SLITRK1Q96PX8 696 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 EDEM2Q9BV94 578 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 TPSD1Q9BZJ3 242 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 NACA2Q9H009 215 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 SMOC1Q9H4F8 434 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 KIAA1586Q9HCI6 787 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 INTS13Q9NVM9 706 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 HSPBP1Q9NZL4 362 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 ANGPTL2Q9UKU9 493 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 PCDHGA5Q9Y5G8 931 aa10.58□□□□□ -0.72
ACTN1-210ENST00000553779 TNRC6BQ9UPQ9 1833 aaKnown RBP10.58□□□□□ -0.72
ACTN1-210ENST00000553779 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SLC9A3R1O14745 358 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 ATP2C2O75185 946 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 ALDH1A2O94788 518 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 MBL2P11226 248 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SYT1P21579 422 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 LIMK1P53667 647 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SOWAHAQ2M3V2 549 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 EML3Q32P44 896 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 NAIF1Q69YI7 327 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 ANO7Q6IWH7 933 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SYT13Q7L8C5 426 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 DDX42Q86XP3 938 aaKnown RBP eCLIP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 CBWD2Q8IUF1 395 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 WDR49Q8IV35 697 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 OR5B17Q8NGF7 314 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 CCDC127Q96BQ5 260 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 DHX58Q96C10 678 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SPACA7Q96KW9 195 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 MYRFLQ96LU7 910 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 USP28Q96RU2 1077 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SLC22A12Q96S37 553 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 MED10Q9BTT4 135 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 STRA6Q9BX79 667 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 FGFBP2Q9BYJ0 223 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 TNMDQ9H2S6 317 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 ZSCAN16Q9H4T2 348 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 POLR3BQ9NW08 1133 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SMPD4Q9NXE4 827 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 SIX4Q9UIU6 781 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 ARHGAP26Q9UNA1 814 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 INVSQ9Y283 1065 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 CACNA1EQ15878 2313 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
ACTN1-210ENST00000553779 F8VP50 259 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 LEFTY2O00292 366 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 SCAMP3O14828 347 aaKnown RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 MAP3K13O43283 966 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 KRT37O76014 449 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 CAVIN2O95810 425 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 ADH1CP00326 375 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 APODP05090 189 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 PFKLP17858 780 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 TRIM21P19474 475 aaKnown RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 WARSP23381 471 aaKnown RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 GNL1P36915 607 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 RAP1GAPP47736 663 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 PPP3CCP48454 512 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 KDSRQ06136 332 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 BIRC3Q13489 604 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 CUL4AQ13619 759 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 SNRNP35Q16560 246 aaKnown RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 PLK5Q496M5 336 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 DAB2IPQ5VWQ8 1189 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 TCEAL6Q6IPX3 200 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 DPH6Q7L8W6 267 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 FILIP1Q7Z7B0 1213 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 NELFCDQ8IXH7 590 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 PGBD3Q8N328 593 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 CCDC33Q8N5R6 958 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 RIN3Q8TB24 985 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 TCEAL3Q969E4 200 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 HPS3Q969F9 1004 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 SPATA17Q96L03 361 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 ELOVL4Q9GZR5 314 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 FBRSL1Q9HCM7 1045 aaKnown RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
ACTN1-210ENST00000553779 CPQQ9Y646 472 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 FRYQ5TBA9 3013 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 UBE4BO95155 1302 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 PTPRJQ12913 1337 aa10.56□□□□□ -0.72
ACTN1-210ENST00000553779 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 A8MXQ7 604 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 GABRDO14764 452 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 KHNYNO15037 678 aaKnown RBP10.55□□□□□ -0.72
ACTN1-210ENST00000553779 DCLK1O15075 740 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 CLIC2O15247 247 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 SPTLC2O15270 562 aa10.55□□□□□ -0.72
ACTN1-210ENST00000553779 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms