RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 GRM3Q14832 879 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 KIAA0753Q2KHM9 967 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 COLEC12Q5KU26 742 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 TREML2Q5T2D2 321 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 FCRLBQ6BAA4 426 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ARHGEF25Q86VW2 580 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ZNF280BQ86YH2 543 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 FMNL3Q8IVF7 1028 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 IZUMO1Q8IYV9 350 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 FAM156AQ8NDB6 213 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 TSR2Q969E8 191 aaKnown RBP4.07□□□□□ -1.76
VRK1-202ENST00000553683 VOPP1Q96AW1 172 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ZNF668Q96K58 619 aaPredicted RBP4.07□□□□□ -1.76
VRK1-202ENST00000553683 FSD1LQ9BXM9 530 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 UNKQ9C0B0 810 aaKnown RBP4.07□□□□□ -1.76
VRK1-202ENST00000553683 SEMA4CQ9C0C4 833 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ZCWPW1Q9H0M4 648 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ZNF287Q9HBT7 754 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 DUSP22Q9NRW4 184 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 ASB6Q9NWX5 421 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 STK32BQ9NY57 414 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 DLL3Q9NYJ7 618 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 OGDHLQ9ULD0 1010 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 CAPN11Q9UMQ6 739 aa4.07□□□□□ -1.76
VRK1-202ENST00000553683 AOX1Q06278 1338 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 LRRC3CA6NJW4 275 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 AQP7P3A6NL99 342 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 TARM1B6A8C7 271 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 MASP2O00187 686 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 QSOX1O00391 747 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 RBMXL2O75526 392 aaKnown RBP4.06□□□□□ -1.76
VRK1-202ENST00000553683 PRKCGP05129 697 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 EBLN1P0CF75 366 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 PEX2P28328 305 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 PRKAR1BP31321 381 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 LIPAP38571 399 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 EEFSECP57772 596 aaKnown RBP4.06□□□□□ -1.76
VRK1-202ENST00000553683 LLGL1Q15334 1064 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 ZIK1Q3SY52 487 aaPredicted RBP4.06□□□□□ -1.76
VRK1-202ENST00000553683 C4orf46Q504U0 113 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 DCAF12L1Q5VU92 463 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 MZT2AQ6P582 158 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 ZNF788Q6ZQV5 615 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 SLC29A4Q7RTT9 530 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 C11orf96Q7Z7L8 435 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 C14orf80Q86SX3 495 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 RASAL3Q86YV0 1011 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 YAF2Q8IY57 180 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 SPARTQ8N0X7 666 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 SEMA6DQ8NFY4 1073 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 OR56A3Q8NH54 315 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 BPIFB1Q8TDL5 484 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 SMCR8Q8TEV9 937 aaPredicted RBP4.06□□□□□ -1.76
VRK1-202ENST00000553683 ZNF384Q8TF68 577 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 GLG1Q92896 1179 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 THAP7Q9BT49 309 aaPredicted RBP4.06□□□□□ -1.76
VRK1-202ENST00000553683 BHMT2Q9H2M3 363 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 COL20A1Q9P218 1284 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 CPNE7Q9UBL6 633 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 DDX20Q9UHI6 824 aaKnown RBP4.06□□□□□ -1.76
VRK1-202ENST00000553683 PADI4Q9UM07 663 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 CDY1Q9Y6F8 540 aa4.06□□□□□ -1.76
VRK1-202ENST00000553683 FNDC1Q4ZHG4 1894 aaPredicted RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 H0YIZ8 118 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 H7C1Q1 480 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 hCG_1984214I3L0E3 225 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 NPSP0C0P6 89 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 MYBP10242 640 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 TXNP10599 105 aaKnown RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 MYCLP12524 364 aaPredicted RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 EPHA3P29320 983 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 CYP2C18P33260 490 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 PRKAG1P54619 331 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 TPTEP56180 551 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 MRPS21P82921 87 aaKnown RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 TIAL1Q01085 375 aaKnown RBP eCLIP4.05□□□□□ -1.76
VRK1-202ENST00000553683 SLC10A2Q12908 348 aaPredicted RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 EIF2B5Q13144 721 aaKnown RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 ARHGEF7Q14155 803 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 NPY5RQ15761 445 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 PPP4R4Q6NUP7 873 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 Q6ZWC4 215 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 MPP5Q8N3R9 675 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 ABHD11Q8NFV4 315 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 PHKBQ93100 1093 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 PPP2R3CQ969Q6 453 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 IL17RBQ9NRM6 502 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 ADARB2Q9NS39 739 aaKnown RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 SACM1LQ9NTJ5 587 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 FLRT1Q9NZU1 646 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 DNMT3BQ9UBC3 853 aaKnown RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 ADAM21Q9UKJ8 722 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 ADAMTS5Q9UNA0 930 aa4.05□□□□□ -1.76
VRK1-202ENST00000553683 MRPS17Q9Y2R5 130 aaKnown RBP4.05□□□□□ -1.76
VRK1-202ENST00000553683 LINC01548A6NM66 108 aa4.04□□□□□ -1.76
VRK1-202ENST00000553683 PSMD9O00233 223 aa4.04□□□□□ -1.76
VRK1-202ENST00000553683 ZNF213O14771 459 aa4.04□□□□□ -1.76
VRK1-202ENST00000553683 FESP07332 822 aa4.04□□□□□ -1.76
VRK1-202ENST00000553683 HNRNPCP07910 306 aaKnown RBP eCLIP4.04□□□□□ -1.76
VRK1-202ENST00000553683 PDHA1P08559 390 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms