RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 PRORYQ9H606 182 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 ARHGEF4Q9NR80 690 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 TOR4AQ9NXH8 423 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 CALCOCO1Q9P1Z2 691 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 KCNG1Q9UIX4 513 aa14.87□□□□□ -0.03
PRPF39-204ENST00000553605 CAPN9O14815 690 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ZNF217O75362 1048 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 DKK1O94907 266 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 OR52Z1P0C646 297 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ATXN1LP0C7T5 689 aaKnown RBP14.86□□□□□ -0.03
PRPF39-204ENST00000553605 MAPTP10636 758 aaKnown RBP14.86□□□□□ -0.03
PRPF39-204ENST00000553605 FDPSP14324 419 aaKnown RBP14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ITPKBP27987 946 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 SMTNP53814 917 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ZXDBP98169 803 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 RESTQ13127 1097 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 NFE2Q16621 373 aaPredicted RBP14.86□□□□□ -0.03
PRPF39-204ENST00000553605 SYCP2LQ5T4T6 812 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 RINT1Q6NUQ1 792 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 FILIP1Q7Z7B0 1213 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 TMEM161BQ8NDZ6 487 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 SPIRE2Q8WWL2 714 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ZNF419Q96HQ0 510 aaPredicted RBP14.86□□□□□ -0.03
PRPF39-204ENST00000553605 RUSC1Q9BVN2 902 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 DNM3Q9UQ16 869 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ANK1P16157 1881 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 HELZP42694 1942 aaKnown RBP14.86□□□□□ -0.03
PRPF39-204ENST00000553605 ZNF462Q96JM2 2506 aa14.86□□□□□ -0.03
PRPF39-204ENST00000553605 FAM149AA5PLN7 773 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 E9PMD0 336 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 LEFTY2O00292 366 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 PFKFB2O60825 505 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 CYP2F1P24903 491 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 TAF6P49848 677 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 PDE6CP51160 858 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 ATP2C1P98194 919 aaPredicted RBP14.85□□□□□ -0.03
PRPF39-204ENST00000553605 TSPY1Q01534 308 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 C1orf186Q6ZWK4 172 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 C12orf40Q86WS4 652 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 SKAP1Q86WV1 359 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 CD302Q8IX05 232 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 BICD1Q96G01 975 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 CDC6Q99741 560 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 PRDM16Q9HAZ2 1276 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 PDRG1Q9NUG6 133 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 CYP8B1Q9UNU6 501 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 CFAP46Q8IYW2 2715 aa14.85□□□□□ -0.03
PRPF39-204ENST00000553605 GOLGA8CPA6NN73 597 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 SLC9A3R1O14745 358 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 OGTO15294 1046 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 ZBTB24O43167 697 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 FAM189A1O60320 539 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 NDUFS2O75306 463 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 NFICP08651 508 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 MAOBP27338 520 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 KDSRQ06136 332 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 TMEM132DQ14C87 1099 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 ZNF174Q15697 407 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 WDR45BQ5MNZ6 344 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 RHBDF2Q6PJF5 856 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 TRMT11Q7Z4G4 463 aaKnown RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 ZNF513Q8N8E2 541 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 KIAA1958Q8N8K9 716 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 BAHD1Q8TBE0 780 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 KCNV2Q8TDN2 545 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 RHBDD1Q8TEB9 315 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 LEO1Q8WVC0 666 aaPredicted RBP14.84□□□□□ -0.03
PRPF39-204ENST00000553605 TM6SF1Q9BZW5 370 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 CCSER1Q9C0I3 900 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 IL21RQ9HBE5 538 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 ABCB6Q9NP58 842 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 LRWD1Q9UFC0 647 aa14.84□□□□□ -0.03
PRPF39-204ENST00000553605 TBC1D3BA6NDS4 549 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 ZNF883P0CG24 379 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 PLS3P13797 630 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 HOXB2P14652 356 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 CFHR1Q03591 330 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 LRRC69Q6ZNQ3 347 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 FOXJ1Q92949 421 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 TIPINQ9BVW5 301 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 GAREM1Q9H706 876 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 TM7SF3Q9NS93 570 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 DERAQ9Y315 318 aa14.83□□□□□ -0.04
PRPF39-204ENST00000553605 SCN1AP35498 2009 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 A0A1B0GTW7 788 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 A0A1W2PQF6 199 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 CAPN8A6NHC0 703 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 KPNA7A9QM74 516 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 E9PAM4 449 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 REC8O95072 547 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 ADH1CP00326 375 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 ADH5P11766 374 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 PFKLP17858 780 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 GUCY2CP25092 1073 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 WASP42768 502 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 LIG4P49917 911 aa14.82□□□□□ -0.04
PRPF39-204ENST00000553605 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.04
PRPF39-204ENST00000553605 FOSBP53539 338 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms