RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SERINC5Q86VE9 423 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 CDR2LQ86X02 465 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 WDTC1Q8N5D0 677 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 PRELID2Q8N945 189 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 BBOF1Q8ND07 529 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SPATA18Q8TC71 538 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 KRT35Q92764 455 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 MAGOHBQ96A72 148 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 MCRS1Q96EZ8 462 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF668Q96K58 619 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 RUFY1Q96T51 708 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 DDX47Q9H0S4 455 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SYNCQ9H7C4 482 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 UBN1Q9NPG3 1134 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 RAB6BQ9NRW1 208 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 SNTG2Q9NY99 539 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 PSD3Q9NYI0 1048 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 AMACRQ9UHK6 382 aa7.71□□□□□ -1.18
ATXN3-221ENST00000553498 PIN4Q9Y237 131 aaKnown RBP7.71□□□□□ -1.18
ATXN3-221ENST00000553498 KIAA1217Q5T5P2 1943 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 SMIM28A0A1B0GU29 152 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ARHGEF37A1IGU5 675 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PIRO00625 290 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 CSDE1O75534 798 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 RECQL4O94761 1208 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 MICAL2O94851 1124 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 TJP3O95049 919 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ECEL1O95672 775 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ERBB2P04626 1255 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 MYBL2P10244 700 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 OAS2P29728 719 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 LRPAP1P30533 357 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PCK1P35558 622 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 COILP38432 576 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 GPD2P43304 727 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 CARSP49589 748 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 FLT3LGP49771 235 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 TAF6P49848 677 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PRMT2P55345 433 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 EIF3BP55884 814 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 RNASE9P60153 205 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 SP3Q02447 781 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 HLTFQ14527 1009 aaKnown RBP eCLIP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF394Q53GI3 561 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 OXLD1Q5BKU9 147 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 FBXO47Q5MNV8 452 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 C9orf57Q5W0N0 161 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ARHGAP17Q68EM7 881 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 CCDC137Q6PK04 289 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 SCARA5Q6ZMJ2 495 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 LIMS2Q7Z4I7 341 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 VSIG1Q86XK7 387 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 JAMLQ86YT9 394 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PASD1Q8IV76 773 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 CRYBG2Q8N1P7 616 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 TOP6BLQ8N6T0 577 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 CASKIN2Q8WXE0 1202 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 NANOS1Q8WY41 292 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 IFT81Q8WYA0 676 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 TFAP2BQ92481 460 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 FAM84AQ96KN4 292 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 TNIP3Q96KP6 325 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 HEXIM2Q96MH2 286 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 UCN2Q96RP3 112 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PPP1R16BQ96T49 567 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 FOXP3Q9BZS1 431 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ELOVL4Q9GZR5 314 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 SDCBP2Q9H190 292 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 SMYD3Q9H7B4 428 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ETNK1Q9HBU6 452 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 XPNPEP3Q9NQH7 507 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 ASNSD1Q9NWL6 643 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 HESX1Q9UBX0 185 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 MTRF1LQ9UGC7 380 aaKnown RBP7.7□□□□□ -1.18
ATXN3-221ENST00000553498 NFU1Q9UMS0 254 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 POLIQ9UNA4 740 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 GINS2Q9Y248 185 aa7.7□□□□□ -1.18
ATXN3-221ENST00000553498 PLXNB2O15031 1838 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 KPNA7A9QM74 516 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF487B1APH4 448 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 M0QYV0 167 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 TTI1O43156 1089 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 HUS1O60921 280 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ZNF623O75123 536 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ADAMTS4O75173 837 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RPS6KA5O75582 802 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RNF8O76064 485 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 TOMM70O94826 608 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RARAP10276 462 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ITGA4P13612 1032 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ITIH2P19823 946 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 WARSP23381 471 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RPL9P32969 192 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RDXP35241 583 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 ACADSBP45954 432 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 RPL34P49207 117 aaKnown RBP7.69□□□□□ -1.18
ATXN3-221ENST00000553498 NDST1P52848 882 aa7.69□□□□□ -1.18
ATXN3-221ENST00000553498 SLC8A3P57103 927 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms