RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 JOSD2Q8TAC2 188 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.56
PSEN1-206ENST00000553447 KCTD13Q8WZ19 329 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 CD101Q93033 1021 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 PBKQ96KB5 322 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 CAPZA3Q96KX2 299 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 SMOQ99835 787 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 HTATIP2Q9BUP3 242 aa18.52■□□□□ 0.56
PSEN1-206ENST00000553447 MRPL42Q9Y6G3 142 aaKnown RBP18.52■□□□□ 0.56
PSEN1-206ENST00000553447 KCNK3O14649 394 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 PAPSS1O43252 624 aaPredicted RBP18.51■□□□□ 0.55
PSEN1-206ENST00000553447 EFEMP2O95967 443 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 LCP1P13796 627 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 LAG3P18627 525 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CTNNA2P26232 953 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 RFC1P35251 1148 aaPredicted RBP18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CDR1P51861 262 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CACNA2D1P54289 1103 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 MAP3K7CLP57077 242 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 SLC6A3Q01959 620 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CKAP4Q07065 602 aaKnown RBP18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CTXN3Q4LDR2 81 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 TMEM240Q5SV17 173 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 KCNT2Q6UVM3 1135 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 C4orf50Q6ZRC1 276 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CREG2Q8IUH2 290 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CEP112Q8N8E3 955 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 FNIP1Q8TF40 1166 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 IGSF21Q96ID5 467 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 B3GALT6Q96L58 329 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 ZNF558Q96NG5 402 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 YME1L1Q96TA2 773 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 UBXN6Q9BZV1 441 aa18.51■□□□□ 0.55
PSEN1-206ENST00000553447 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 OR6C75A6NL08 312 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 H7C4K7 107 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 OR4Q2P0C623 313 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 SYN1P17600 705 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 CTNNA1P35221 906 aaKnown RBP18.5■□□□□ 0.55
PSEN1-206ENST00000553447 SCNN1AP37088 669 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-206ENST00000553447 SLC39A12Q504Y0 691 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 SPATA2LQ8IUW3 424 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-206ENST00000553447 SCUBE3Q8IX30 993 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 RNF168Q8IYW5 571 aaPredicted RBP18.5■□□□□ 0.55
PSEN1-206ENST00000553447 SLC39A11Q8N1S5 342 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 UBL4BQ8N7F7 174 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 NIPA2Q8N8Q9 360 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 MNS1Q8NEH6 495 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 KRT35Q92764 455 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 PIWIL1Q96J94 861 aaKnown RBP18.5■□□□□ 0.55
PSEN1-206ENST00000553447 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.5■□□□□ 0.555e-12■□□□□ 10.8
PSEN1-206ENST00000553447 TTPALQ9BTX7 342 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 RHOBTB2Q9BYZ6 727 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 LRRC4Q9HBW1 653 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 CSNK1G1Q9HCP0 422 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 TMEM30AQ9NV96 361 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 TMEM59LQ9UK28 342 aa18.5■□□□□ 0.55
PSEN1-206ENST00000553447 CARNS1A5YM72 827 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 GJB5O95377 273 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 BDNFP23560 247 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 PSMA2P25787 234 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 TERF1P54274 439 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 HTRA4P83105 476 aaPredicted RBP18.49■□□□□ 0.55
PSEN1-206ENST00000553447 ADIGQ0VDE8 80 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 ANKS3Q6ZW76 656 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 TAS1R1Q7RTX1 841 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 EMC1Q8N766 993 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 COLGALT1Q8NBJ5 622 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 LRRN4CLQ8ND94 238 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 KCNK16Q96T55 309 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 VN1R3Q9BXE9 311 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 OXCT2Q9BYC2 517 aaPredicted RBP18.49■□□□□ 0.55
PSEN1-206ENST00000553447 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
PSEN1-206ENST00000553447 RNF14Q9UBS8 474 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 USTQ9Y2C2 406 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 PCDHA3Q9Y5H8 950 aa18.49■□□□□ 0.55
PSEN1-206ENST00000553447 HHLA1C9JL84 531 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 PDE2AO00408 941 aaPredicted RBP18.48■□□□□ 0.55
PSEN1-206ENST00000553447 TBC1D4O60343 1298 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 GPD1P21695 349 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 MARCKSL1P49006 195 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 PEX5P50542 639 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 ADCY1Q08828 1119 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 NFE2Q16621 373 aaPredicted RBP18.48■□□□□ 0.55
PSEN1-206ENST00000553447 USP41Q3LFD5 358 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 DCAF12L1Q5VU92 463 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 SLC26A9Q7LBE3 791 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 CLEC4CQ8WTT0 213 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 HERVK_113Q902F9 699 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 ALG3Q92685 438 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 KHSRPQ92945 711 aaKnown RBP eCLIP18.48■□□□□ 0.551e-7■■■■□ 24
PSEN1-206ENST00000553447 MS4A14Q96JA4 679 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 CARD9Q9H257 536 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 CXXC1Q9P0U4 656 aaPredicted RBP18.48■□□□□ 0.55
PSEN1-206ENST00000553447 ZMYND8Q9ULU4 1186 aaPredicted RBP18.48■□□□□ 0.55
PSEN1-206ENST00000553447 MYO16Q9Y6X6 1858 aa18.48■□□□□ 0.55
PSEN1-206ENST00000553447 C2CD4BA6NLJ0 364 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms