RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PTK2Q05397 1052 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 PDE4CQ08493 712 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 MTMR3Q13615 1198 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 STILQ15468 1287 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 LEXMQ3ZCV2 418 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 RAB41Q5JT25 222 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 DENND1BQ6P3S1 775 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 POTEHQ6S545 545 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 CYP26C1Q6V0L0 522 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 CACNA2D4Q7Z3S7 1137 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 DNAJB7Q7Z6W7 309 aaPredicted RBP15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 TMEM150AQ86TG1 271 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 SYN2Q92777 582 aaPredicted RBP15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 HLA-CQ95604 372 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 PSMG2Q969U7 264 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 MYRFLQ96LU7 910 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 DNAJC7Q99615 494 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 MED10Q9BTT4 135 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 TTLL2Q9BWV7 592 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 UBXN6Q9BZV1 441 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 PNPLA8Q9NP80 782 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 AVENQ9NQS1 362 aaPredicted RBP15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 DNMT3BQ9UBC3 853 aaKnown RBP15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 CD207Q9UJ71 328 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 COG5Q9UP83 839 aa15.71■□□□□ 0.11
MTHFD1-204ENST00000553405 ZNF638Q14966 1978 aaKnown RBP15.71■□□□□ 0.1
MTHFD1-204ENST00000553405 VCANP13611 3396 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 ATP8B3O60423 1300 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 OBSL1O75147 1896 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 SLC38A8A6NNN8 435 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 TRIM66O15016 1216 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 THAP12O43422 761 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 CDH5P33151 784 aaPredicted RBP15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 GRIK1P39086 918 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 CCR2P41597 374 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 PLA2G4AP47712 749 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 ALDH1A3P47895 512 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 BCAT1P54687 386 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 MAP3K7CLP57077 242 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 RPL10AP62906 217 aaKnown RBP15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 FMO1Q01740 532 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 ITIH3Q06033 890 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 PLD1Q13393 1074 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 SLC5A9Q2M3M2 681 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 PRSS36Q5K4E3 855 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 SCN4BQ8IWT1 228 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 UBA3Q8TBC4 463 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 GIPC2Q8TF65 315 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 TRMT2BQ96GJ1 504 aaKnown RBP15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 APOL5Q9BWW9 433 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 DNAI2Q9GZS0 605 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 ASB3Q9Y575 518 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.7■□□□□ 0.14e-7■□□□□ 8.7
MTHFD1-204ENST00000553405 USP3Q9Y6I4 520 aa15.7■□□□□ 0.1
MTHFD1-204ENST00000553405 MYH10P35580 1976 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 XPO1O14980 1071 aaKnown RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 MBTPS2O43462 519 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 MFAP3LO75121 409 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 TADA3O75528 432 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 ADCY5O95622 1261 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 LRG1P02750 347 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 SETSIPP0DME0 302 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 FERP16591 822 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 CDC25BP30305 580 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 KIF11P52732 1056 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 EPHB3P54753 998 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 NTHL1P78549 312 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 TFF2Q03403 129 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 GOLGA8FQ08AF8 430 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 GOLGA8DPQ0D2H9 430 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 BST2Q10589 180 aaKnown RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 SMAD4Q13485 552 aaKnown RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 TRIM14Q14142 442 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 CLUL1Q15846 466 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 PMF1Q6P1K2 205 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 ELMSAN1Q6PJG2 1045 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 WDR59Q6PJI9 974 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 GAREM2Q75VX8 874 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 BHLHA9Q7RTU4 235 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 TMC6Q7Z403 805 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 PIGZQ86VD9 579 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 HS6ST3Q8IZP7 471 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 SCAMP5Q8TAC9 235 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 SECISBP2LQ93073 1101 aaKnown RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 PCDHB18PQ96TA0 734 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 LHX5Q9H2C1 402 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 GRPEL1Q9HAV7 217 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 WDR6Q9NNW5 1121 aaKnown RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 USP15Q9Y4E8 981 aaPredicted RBP15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 DOCK8Q8NF50 2099 aa15.69■□□□□ 0.1
MTHFD1-204ENST00000553405 DENND4CQ5VZ89 1909 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 M0QYV0 167 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 XYLBO75191 536 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 F11P03951 625 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 MMEP08473 750 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 PGFP49763 221 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 SLC5A3P53794 718 aa15.68■□□□□ 0.1
MTHFD1-204ENST00000553405 CDR2Q01850 454 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms